Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCSER1Q9C0I3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 SNORA51.8-201ENST00000384234 132 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 OR2AM1P-201ENST00000422137 422 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AL590762.4-201ENST00000425885 253 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 PRPF38AP2-201ENST00000438179 851 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC023424.1-201ENST00000496058 459 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 BTF3P13-201ENST00000513224 490 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 CCNHP1-201ENST00000513311 678 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 PCNPP1-201ENST00000552501 511 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC011487.3-201ENST00000593607 453 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC005084.1-201ENST00000605160 304 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 BNIP3P41-202ENST00000616656 861 ntBASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CCSER1Q9C0I3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCSER1Q9C0I3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCSER1Q9C0I3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
CCSER1Q9C0I3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.4□□□□□ -1.55
CCSER1Q9C0I3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCSER1Q9C0I3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AL022322.2-201ENST00000624072 20397 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 ZFRP1-201ENST00000457579 2970 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AL592291.1-201ENST00000403830 352 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 RBMY2KP-201ENST00000418221 992 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 RPL7P57-201ENST00000423238 740 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 HSPE1P16-201ENST00000426640 348 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC007559.1-201ENST00000428736 355 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 RPL31P44-201ENST00000447680 377 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC234781.3-201ENST00000452540 973 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AL645937.3-201ENST00000453647 936 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AL591473.1-201ENST00000464297 313 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 OR10D4P-201ENST00000525892 951 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC021006.3-201ENST00000530771 192 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC018552.1-201ENST00000562099 811 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AP005262.1-201ENST00000582646 997 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC008536.1-201ENST00000602872 669 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 RNF138P2-201ENST00000603490 592 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC087385.3-201ENST00000620477 187 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AC015871.5-202ENST00000623252 701 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 AL121950.1-201ENST00000624993 2077 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 NCLP2-201ENST00000416078 1462 ntBASIC5.39□□□□□ -1.55
CCSER1Q9C0I3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 PA2G4P6-201ENST00000438325 1197 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 OR52J1P-201ENST00000450596 932 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 RPS5P7-201ENST00000456664 608 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 EDDM3DP-201ENST00000554692 434 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 MTND2P13-201ENST00000577438 1039 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms