Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ABCA3Q99758 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
ABCA3Q99758 RNA5SP124-201ENST00000362739 110 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 MIR670-201ENST00000390142 98 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.08□□□□□ -1.44
ABCA3Q99758 AL139095.3-201ENST00000419672 1203 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 OR52E3P-201ENST00000452083 936 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AC079804.1-201ENST00000461922 436 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 RPS27AP13-201ENST00000498403 237 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AC023632.4-201ENST00000517783 191 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 RN7SL600P-201ENST00000581811 299 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AC006116.5-201ENST00000591936 559 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 IPO5P1-202ENST00000600039 287 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AL354984.3-201ENST00000604803 325 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.08□□□□□ -1.44
ABCA3Q99758 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCA3Q99758 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
ABCA3Q99758 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCA3Q99758 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ABCA3Q99758 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCA3Q99758 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ABCA3Q99758 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ABCA3Q99758 AMZ2P2-201ENST00000406819 1057 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 AL356276.2-201ENST00000435919 558 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 RPS29P7-201ENST00000439662 171 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 RPL23AP43-201ENST00000446445 471 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ABCA3Q99758 NPM1P41-201ENST00000512920 831 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCA3Q99758 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCA3Q99758 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCA3Q99758 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCA3Q99758 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.08□□□□□ -1.44
ABCA3Q99758 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCA3Q99758 CDRT1-208ENST00000630868 794 ntBASIC6.08□□□□□ -1.44
ABCA3Q99758 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.08□□□□□ -1.44
ABCA3Q99758 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.08□□□□□ -1.44
ABCA3Q99758 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 AC108467.2-201ENST00000617640 1597 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 RPL23AP38-201ENST00000423801 469 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 AC091959.2-201ENST00000477363 321 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 AL132838.2-201ENST00000492041 314 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCA3Q99758 AP000827.1-201ENST00000527814 258 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCA3Q99758 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 AP003400.2-201ENST00000624036 666 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 MIR3653-201ENST00000625572 110 ntBASIC6.07□□□□□ -1.44
ABCA3Q99758 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCA3Q99758 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCA3Q99758 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ABCA3Q99758 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 AC010168.2-201ENST00000562691 5428 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCA3Q99758 RNU1-132P-201ENST00000364300 164 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 RNU6-628P-201ENST00000410675 107 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCA3Q99758 AL445584.1-201ENST00000431451 330 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 NPM1P18-201ENST00000434232 732 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.06□□□□□ -1.44
ABCA3Q99758 AK4P6-201ENST00000505168 528 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 AP001804.2-201ENST00000533932 910 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCA3Q99758 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCA3Q99758 BNIP3P11-201ENST00000603878 563 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 AL391684.1-202ENST00000641293 1636 ntBASIC6.06□□□□□ -1.44
ABCA3Q99758 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCA3Q99758 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ABCA3Q99758 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCA3Q99758 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ABCA3Q99758 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
ABCA3Q99758 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ABCA3Q99758 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ABCA3Q99758 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms