Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC068768.2-201ENST00000602352 343 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 OR2BH1P-201ENST00000608850 864 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC096586.1-201ENST00000610267 561 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 TUSC7.1-201ENST00000610969 165 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SNX18Q96RF0 AC025574.1-201ENST00000554784 1653 ntBASIC5.24□□□□□ -1.57
SNX18Q96RF0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AP005432.1-201ENST00000580891 3485 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 SELENOWP1-201ENST00000322792 252 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 RNU4-92P-201ENST00000363783 136 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 SNRPEP6-201ENST00000407465 277 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AL356320.2-201ENST00000417263 507 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC066692.1-201ENST00000421721 457 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 HMGB3P6-201ENST00000444896 598 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AL035407.2-201ENST00000454090 378 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 RPL12P39-201ENST00000455456 496 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 RPL5P22-201ENST00000480199 884 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC025458.1-201ENST00000506046 166 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC127381.1-201ENST00000555979 939 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 SETP1-201ENST00000556014 845 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC008521.2-201ENST00000591021 259 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AL138478.1-201ENST00000612252 832 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 OR8G7P-201ENST00000616658 848 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC092140.2-201ENST00000618027 521 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC026124.2-201ENST00000621847 656 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC131159.1-201ENST00000621854 213 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AP000676.3-201ENST00000623299 569 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 Z98755.1-201ENST00000407015 1384 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC104454.1-201ENST00000421341 1401 ntBASIC5.23□□□□□ -1.57
SNX18Q96RF0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX18Q96RF0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 ZNF733P-202ENST00000444809 1573 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC023490.2-201ENST00000359859 470 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 RNU4-51P-201ENST00000364206 140 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX18Q96RF0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX18Q96RF0 RPL23AP59-201ENST00000399415 461 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 RPS7P9-201ENST00000414704 586 ntBASIC5.22□□□□□ -1.57
SNX18Q96RF0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms