Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC009163.6-201ENST00000612367 342 ntBASIC5.02□□□□□ -1.61
CCDC42Q96M95 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC42Q96M95 AC011503.2-201ENST00000594230 1500 ntBASIC5.02□□□□□ -1.61
CCDC42Q96M95 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC007382.1-201ENST00000624376 2618 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 DPPA2P3-201ENST00000411853 655 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 PDSS1P1-201ENST00000422953 1114 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC092647.3-201ENST00000443044 633 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 RPS5P7-201ENST00000456664 608 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC012158.1-204ENST00000483430 465 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC109462.1-201ENST00000491087 368 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 STMN1P2-201ENST00000508435 439 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 IGKV3D-34-201ENST00000522638 302 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 MORF4L1P3-201ENST00000525966 950 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC091178.1-203ENST00000584586 279 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 AC091979.2-201ENST00000607514 214 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC42Q96M95 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC42Q96M95 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.01□□□□□ -1.61
CCDC42Q96M95 AL442639.1-201ENST00000625030 1899 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 LINC01109-201ENST00000603837 3081 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5□□□□□ -1.61
CCDC42Q96M95 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC42Q96M95 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC42Q96M95 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC42Q96M95 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC42Q96M95 RNU1-106P-201ENST00000384382 164 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5□□□□□ -1.61
CCDC42Q96M95 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC42Q96M95 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AL591848.1-201ENST00000413092 322 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 CHEK2P3-201ENST00000416118 248 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 CYCSP10-201ENST00000417973 294 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC42Q96M95 RPL21P91-201ENST00000429231 479 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC42Q96M95 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5□□□□□ -1.61
CCDC42Q96M95 AC112498.1-201ENST00000444401 332 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AC073587.1-201ENST00000447093 876 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AL591363.1-201ENST00000450091 483 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AC010733.1-201ENST00000451515 401 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5□□□□□ -1.61
CCDC42Q96M95 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5□□□□□ -1.61
CCDC42Q96M95 RPL37AP8-201ENST00000494116 276 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 RN7SL101P-201ENST00000496350 279 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AK4P6-201ENST00000505168 528 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5□□□□□ -1.61
CCDC42Q96M95 AC013701.1-201ENST00000522657 465 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5□□□□□ -1.61
CCDC42Q96M95 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5□□□□□ -1.61
CCDC42Q96M95 MIR3691-201ENST00000578066 90 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 MIR1269B-201ENST00000580405 75 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5□□□□□ -1.61
CCDC42Q96M95 5S_rRNA.16-201ENST00000612928 119 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AL121890.2-201ENST00000617644 465 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
CCDC42Q96M95 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5□□□□□ -1.61
CCDC42Q96M95 MIPEPP2-201ENST00000422560 1819 ntBASIC5□□□□□ -1.61
CCDC42Q96M95 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 HCFC2P1-201ENST00000392864 1592 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 OR14L1P-202ENST00000641545 3009 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC42Q96M95 RN7SKP95-201ENST00000362860 303 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AL672167.2-201ENST00000377164 879 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AL050305.1-201ENST00000399993 1230 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 OR51B3P-201ENST00000412287 913 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC42Q96M95 AC013410.1-201ENST00000436223 1232 ntBASIC4.99□□□□□ -1.61
CCDC42Q96M95 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms