Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 MTCO1P11-201ENST00000429111 1528 ntBASIC5.48□□□□□ -1.53
VPS50Q96JG6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS50Q96JG6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS50Q96JG6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC017007.4-201ENST00000503353 1352 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 RNU6-244P-201ENST00000391028 104 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC104297.1-201ENST00000393779 870 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 CHMP1B2P-201ENST00000399581 597 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC093155.2-201ENST00000420734 937 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 BX323845.3-201ENST00000428215 527 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC002504.1-201ENST00000438281 691 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC012512.1-201ENST00000446594 718 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC092155.2-201ENST00000454675 477 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC023141.9-201ENST00000458734 412 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 RPS17P15-201ENST00000475609 349 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL671862.1-201ENST00000515851 349 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC079064.1-201ENST00000528365 362 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC087888.1-201ENST00000550884 1254 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 GARSP1-201ENST00000570895 719 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC027455.1-201ENST00000574104 594 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 HIRAP1-201ENST00000605318 787 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC109309.2-201ENST00000612597 332 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL162574.1-201ENST00000615702 950 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AC011330.2-201ENST00000621680 635 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 AL390318.1-201ENST00000624564 687 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VPS50Q96JG6 CIR1P2-201ENST00000514821 1342 ntBASIC5.47□□□□□ -1.53
VPS50Q96JG6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS50Q96JG6 AP004607.3-201ENST00000530354 3915 ntBASIC5.46□□□□□ -1.53
VPS50Q96JG6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
VPS50Q96JG6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VPS50Q96JG6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.53
VPS50Q96JG6 AC112198.2-201ENST00000426589 6996 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 TAS2R15P-201ENST00000390674 928 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 MCTS2P-201ENST00000394552 546 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 RN7SKP97-201ENST00000410966 333 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC092638.1-201ENST00000411966 1275 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 CTSL3P-202ENST00000412179 788 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL513325.1-201ENST00000417716 1034 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 OR6C64P-201ENST00000419708 825 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 MTCO2P21-201ENST00000419780 677 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 NPM1P22-201ENST00000427761 952 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 324.8 ms