Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 CIR1P2-201ENST00000514821 1342 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 DDX18P5-201ENST00000534547 1306 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC008549.2-201ENST00000333482 706 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 RNU6-1263P-201ENST00000384601 106 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 MIR765-201ENST00000390226 114 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC092642.1-201ENST00000392417 425 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 TBCAP2-201ENST00000416175 326 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 EIF4HP2-201ENST00000424380 563 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC093414.1-201ENST00000434712 514 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 RPL7P11-201ENST00000437586 658 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 RN7SL319P-201ENST00000480656 221 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC090686.1-201ENST00000481577 749 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC116562.1-201ENST00000485355 781 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC020890.1-201ENST00000491837 504 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 RPL37AP8-201ENST00000494116 276 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC093763.2-201ENST00000505334 1223 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 DYNLL1P4-201ENST00000549314 266 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 HMGB3P26-201ENST00000560051 582 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AP005119.2-201ENST00000579735 1105 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC010424.2-201ENST00000607594 443 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AL121612.2-201ENST00000612261 482 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC009163.6-201ENST00000612367 342 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 AC243960.7-201ENST00000623532 707 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 CASC19-281ENST00000642118 1554 ntBASIC4□□□□□ -1.77
ZNF439Q8NDP4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4□□□□□ -1.77
ZNF439Q8NDP4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF439Q8NDP4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 SMG1P6-201ENST00000532337 2930 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 HMGB3P7-201ENST00000400214 611 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AP002530.1-201ENST00000405705 684 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 U3.35-201ENST00000408405 208 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 GTF2IP5-201ENST00000414608 731 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 GTF3AP1-201ENST00000416942 1004 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AL358176.3-201ENST00000420757 454 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 RGS17P1-201ENST00000423358 553 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC073850.1-201ENST00000449243 255 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC022795.1-201ENST00000473808 480 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 RN7SKP66-201ENST00000516681 231 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 RN7SKP147-201ENST00000517154 244 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.99□□□□□ -1.77
ZNF439Q8NDP4 AL022401.1-201ENST00000619498 108 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms