Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 AC004158.1-201ENST00000564508 4319 ntBASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC33Q8N5R6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RNA5SP27-201ENST00000363839 119 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RPL23AP59-201ENST00000399415 461 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 TCEA1P4-201ENST00000415066 844 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RNGTTP1-201ENST00000420965 728 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 CYCSP6-201ENST00000434498 302 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 CYCSP12-201ENST00000437729 300 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 SEPT14P24-201ENST00000447236 180 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 OFD1P3Y-201ENST00000453312 783 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC005532.2-201ENST00000467154 373 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RN7SL583P-201ENST00000475692 287 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC118282.1-201ENST00000506408 765 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 SNORA19.3-201ENST00000516165 130 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RN7SKP99-201ENST00000517028 307 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 CDC42P3-201ENST00000518493 633 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 MIR548Y-201ENST00000582739 110 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC063944.3-201ENST00000609969 533 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC096586.1-201ENST00000610267 561 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 Z95327.3-201ENST00000610385 572 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC007786.3-201ENST00000615154 596 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC037198.3-201ENST00000616754 526 ntBASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC33Q8N5R6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 RN7SKP145-201ENST00000363291 303 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 RNU4-2-201ENST00000365668 141 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 U6.112-201ENST00000384129 70 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 MIR223-201ENST00000385204 110 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 PEX12P1-201ENST00000400284 1048 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 USP9YP21-201ENST00000420603 432 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AL139148.1-201ENST00000427122 680 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 MTCO1P53-201ENST00000441633 699 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AURKAPS1-201ENST00000451805 1212 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 VDAC2P4-201ENST00000452925 711 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 RN7SL172P-201ENST00000460535 303 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 HPRT1P1-201ENST00000509498 657 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC091163.3-201ENST00000518269 1144 ntBASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC33Q8N5R6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms