Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RGS17P1-201ENST00000423358 553 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 RPS12P5-201ENST00000423449 371 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 CKS1BP6-201ENST00000424932 240 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 FGF7P3-201ENST00000454645 303 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 CYCSP34-201ENST00000458172 304 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 RPL23AP56-201ENST00000460778 453 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC112206.1-201ENST00000468416 477 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC004815.1-201ENST00000484185 331 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AL049839.1-201ENST00000556151 657 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC011487.3-201ENST00000593607 453 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC087763.1-201ENST00000603391 286 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MIR8069-1-201ENST00000616627 86 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MIR8069-2-201ENST00000621412 86 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC067931.1-201ENST00000624190 671 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 AC007382.1-201ENST00000624376 2618 ntBASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.82□□□□□ -1.8
TTC9CQ8N5M4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RN7SKP95-201ENST00000362860 303 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 MIR137-201ENST00000385223 102 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 LAP3P1-201ENST00000403648 294 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AP000580.1-201ENST00000404439 358 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AL512430.2-201ENST00000406786 339 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 U3.35-201ENST00000408405 208 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC114755.2-201ENST00000413520 361 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 CHEK2P3-201ENST00000416118 248 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 VN1R37P-201ENST00000419096 748 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RPS17P8-201ENST00000434525 335 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC004938.1-201ENST00000438468 308 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RHEBP2-201ENST00000450289 600 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 OTX2P1-201ENST00000450956 354 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 GAPDHP56-201ENST00000506031 988 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 RNA5SP392-201ENST00000516905 112 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 NPM1P6-201ENST00000521088 871 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC020910.3-201ENST00000603701 874 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AP000894.4-201ENST00000610185 483 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 AC007497.1-201ENST00000610421 561 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 SALL4P2-201ENST00000423288 2910 ntBASIC3.81□□□□□ -1.8
TTC9CQ8N5M4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 INTS6P1-201ENST00000504674 2530 ntBASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC9CQ8N5M4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms