Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TAS2R15P-201ENST00000390674 928 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 RNU4-64P-201ENST00000410795 131 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 OR5M12P-201ENST00000423388 929 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AL512637.2-201ENST00000431287 1256 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 MTCYBP21-201ENST00000443300 1113 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 TCEA1P1-201ENST00000449716 880 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC103987.1-201ENST00000473394 348 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 RN7SL814P-201ENST00000487715 300 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 IGBP1P5-201ENST00000507524 1000 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 MTCO3P27-201ENST00000514397 196 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 RNU6-334P-201ENST00000517072 102 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 UBTFL10-201ENST00000528532 562 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 NPM1P35-201ENST00000533043 868 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 CKS1BP1-201ENST00000555221 240 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC234772.3-201ENST00000602277 528 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 RNF138P2-201ENST00000603490 592 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC012557.2-201ENST00000605919 418 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC000095.2-202ENST00000637415 154 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 OR9K1P-202ENST00000641111 3217 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 ZNF29P-201ENST00000225587 168 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 SNORA27.3-201ENST00000364937 134 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 RNU6-1257P-201ENST00000384625 110 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 GLULP6-201ENST00000399502 913 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 HNRNPDP2-201ENST00000406475 478 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AL024507.1-201ENST00000412741 274 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 MTND4LP21-201ENST00000415303 295 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 MTND5P25-201ENST00000430499 799 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 RPL7P34-201ENST00000433316 712 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 OR52J1P-201ENST00000450596 932 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC007537.2-201ENST00000472093 511 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AL161747.1-201ENST00000480068 358 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC019322.1-201ENST00000571869 389 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC008088.1-201ENST00000580993 280 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 NIFKP6-201ENST00000598115 845 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC011453.2-201ENST00000603737 729 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AL358072.1-201ENST00000604156 575 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 MIR6133-201ENST00000617057 108 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC007275.1-201ENST00000621243 671 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 LINC00216-201ENST00000623548 1126 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 AC017104.5-201ENST00000637647 639 ntBASIC6.37□□□□□ -1.39
SYNE4Q8N205 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNE4Q8N205 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SYNE4Q8N205 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms