Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 BTF3P13-201ENST00000513224 490 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 RNA5SP360-201ENST00000516555 118 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 MORF4L1P3-201ENST00000525966 950 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AC087477.6-201ENST00000559595 843 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 RN7SL435P-201ENST00000584418 282 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AL133406.3-201ENST00000606817 541 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AC009950.2-201ENST00000636548 183 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 TLK1P1-201ENST00000456760 2440 ntBASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC65Q8IXS2 AC005332.5-201ENST00000591222 2919 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 CR383656.5-201ENST00000547616 1340 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 DHX9P1-201ENST00000436565 3076 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC005522.1-201ENST00000395416 346 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AL645927.1-201ENST00000396783 406 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AL589647.1-201ENST00000402485 466 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 Z68694.1-201ENST00000413929 841 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC073136.2-201ENST00000417282 849 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 VN1R37P-201ENST00000419096 748 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 NMNAT1P2-201ENST00000435192 860 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC110775.1-201ENST00000513721 462 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 BUD31P1-201ENST00000521828 359 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 OR5AZ1P-201ENST00000527448 943 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC011453.2-201ENST00000603737 729 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AP003072.5-201ENST00000623872 773 ntBASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC65Q8IXS2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC65Q8IXS2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CCDC65Q8IXS2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC65Q8IXS2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL359643.1-201ENST00000404109 423 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 SUMO2P1-206ENST00000445436 284 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 OTX2P1-201ENST00000450956 354 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AURKAPS2-201ENST00000454983 333 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AC005000.1-201ENST00000536192 288 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 EDDM3DP-201ENST00000554692 434 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AC093249.4-201ENST00000564755 259 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AC022726.1-201ENST00000587475 207 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 MIR8069-1-201ENST00000616627 86 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 MIR8069-2-201ENST00000621412 86 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 AL513548.1-201ENST00000562904 1724 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 MTND5P23-201ENST00000430812 1655 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 MAPK10-263ENST00000641052 4307 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 SAMMSON-226ENST00000642089 1582 ntBASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC65Q8IXS2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms