Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC073648.4-201ENST00000442655 781 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 RBMY2TP-201ENST00000451162 947 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC091685.2-201ENST00000454924 864 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AL049830.4-201ENST00000555149 351 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 MIR3667-201ENST00000581025 74 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 MIR4737-201ENST00000583979 81 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC004948.1-201ENST00000609858 672 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 AC007497.1-201ENST00000610421 561 ntBASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
C9orf40Q8IXQ3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC017079.1-201ENST00000333650 415 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RNA5SP87-201ENST00000384155 118 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 MIR1271-201ENST00000408537 86 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RNA5SP113-201ENST00000410486 84 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 SBDSP1-204ENST00000453858 737 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 IGLV2-34-201ENST00000490007 283 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RN7SL558P-201ENST00000497468 299 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 ENPP7P9-201ENST00000514456 627 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC117525.1-201ENST00000515228 503 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 MIR4480-201ENST00000582492 71 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RN7SL435P-201ENST00000584418 282 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC067838.1-201ENST00000606064 577 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 BX323046.1-201ENST00000610145 535 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AC011503.2-201ENST00000594230 1500 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 AL731532.2-201ENST00000623542 1953 ntBASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
C9orf40Q8IXQ3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AL031595.2-201ENST00000624215 19071 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 MIR365B-201ENST00000362317 111 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 RNU6-618P-201ENST00000363518 112 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC114755.2-201ENST00000413520 361 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 OR2B7P-201ENST00000429302 934 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC092447.2-201ENST00000435487 669 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 OR7H2P-201ENST00000513483 306 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms