Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC109347.2-201ENST00000610220 349 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC018755.4-201ENST00000619715 454 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC000095.2-202ENST00000637415 154 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.53□□□□□ -1.52
VRK3Q8IV63 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VRK3Q8IV63 AC232271.1-201ENST00000602455 2715 ntBASIC5.53□□□□□ -1.52
VRK3Q8IV63 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC020656.2-201ENST00000613291 5309 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 UGT2B24P-201ENST00000514441 1597 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 Y_RNA.559-201ENST00000384686 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-1320P-201ENST00000390838 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 U3.23-201ENST00000391132 200 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-1269P-201ENST00000391139 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 MTND4LP20-201ENST00000402379 270 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RPL7P27-201ENST00000403775 720 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 SEPT7P8-201ENST00000413308 775 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC011233.1-201ENST00000422812 283 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 MRPS21P2-201ENST00000424704 264 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC006335.2-201ENST00000437993 330 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC005297.1-201ENST00000444765 862 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 EEF1B2P6-201ENST00000445713 673 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL929288.2-201ENST00000446368 407 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RPS23P9-201ENST00000448848 438 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-599P-201ENST00000459383 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-1193P-201ENST00000459461 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC104685.1-201ENST00000502445 371 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC010460.1-201ENST00000507087 466 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 GAPDHP62-201ENST00000515313 990 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-720P-201ENST00000516363 108 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC002400.1-201ENST00000569310 726 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 VN1R88P-201ENST00000596787 292 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 U6.42-201ENST00000618440 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-368P-201ENST00000620928 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RNU6-538P-201ENST00000622329 107 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 AC015804.1-201ENST00000622935 435 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 OR4G1P-202ENST00000641173 1788 ntBASIC5.52□□□□□ -1.53
VRK3Q8IV63 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VRK3Q8IV63 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
VRK3Q8IV63 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC114786.1-201ENST00000512892 1415 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL031985.1-201ENST00000392713 418 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms