Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC011476.1-201ENST00000466725 307 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC068587.2-201ENST00000478386 781 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 RN7SL273P-201ENST00000481561 299 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC022133.1-201ENST00000490961 571 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 RPS12P31-201ENST00000491419 398 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 RPL15P21-201ENST00000495592 567 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC022360.1-201ENST00000521058 340 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 EEF1A1P37-201ENST00000522748 715 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 TRIM77BP-201ENST00000524985 1119 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 ZNF971P-201ENST00000562068 1249 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC073387.2-201ENST00000604797 784 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AL450336.1-201ENST00000605180 586 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 AC106052.1-201ENST00000608029 497 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AP005432.1-201ENST00000580891 3485 ntBASIC4.83□□□□□ -1.64
SHFQ7M4L6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHFQ7M4L6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHFQ7M4L6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC026523.2-201ENST00000625039 7739 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC021242.1-201ENST00000507315 2035 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 IFIT1P1-201ENST00000400497 1449 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 MTCO1P18-201ENST00000455518 1419 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNA5SP394-201ENST00000364216 119 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 U6.112-201ENST00000384129 70 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-532P-201ENST00000384318 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 SNORA16A-201ENST00000384342 137 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-1320P-201ENST00000390838 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-1269P-201ENST00000391139 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RPL5P19-201ENST00000404228 893 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RN7SKP199-201ENST00000410325 305 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 OR51B3P-201ENST00000412287 913 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 HMGB3P31-201ENST00000413333 595 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 MTATP6P20-201ENST00000414147 562 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL592310.1-201ENST00000414330 671 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 COX5BP7-201ENST00000414780 274 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 SSR1P2-201ENST00000415208 787 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC066692.1-201ENST00000421721 457 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 OSTCP5-201ENST00000425293 453 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC092447.3-201ENST00000426027 686 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 ARAFP2-201ENST00000440565 559 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL445665.1-202ENST00000452436 324 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 VDAC2P4-201ENST00000452925 711 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-599P-201ENST00000459383 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-1193P-201ENST00000459461 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC021660.1-201ENST00000465006 554 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC020898.1-201ENST00000474167 787 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AP002884.1-201ENST00000479691 655 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC093752.1-206ENST00000511823 336 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-1004P-201ENST00000516584 111 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 OR8K4P-201ENST00000534608 872 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC040958.1-201ENST00000561102 201 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 NDUFA5P11-201ENST00000567995 343 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL049844.2-201ENST00000604280 628 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL365400.2-201ENST00000605604 902 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL135786.2-201ENST00000608422 615 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms