Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 SNORD1C-201ENST00000363315 78 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC069154.1-201ENST00000432914 542 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 ATP5F1P1-201ENST00000433775 569 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 SEPT7P5-201ENST00000434048 306 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 PPIAP17-201ENST00000438507 471 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL353662.1-201ENST00000439099 327 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC093155.1-201ENST00000440164 826 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC243772.1-201ENST00000451620 410 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 RPL37P3-201ENST00000456825 293 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC010468.1-201ENST00000461022 817 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC090602.1-201ENST00000469695 252 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 OR7E99P-201ENST00000505750 922 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC008494.2-201ENST00000514544 370 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC087808.1-201ENST00000520501 361 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC004217.3-201ENST00000551552 878 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC008015.1-201ENST00000555505 465 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 OR1E3-201ENST00000575608 948 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC008507.3-201ENST00000585753 472 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC119403.2-201ENST00000590960 598 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC069304.3-201ENST00000603938 1084 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC009027.1-201ENST00000604510 479 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL451074.6-201ENST00000608512 729 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 VIS1.1-201ENST00000610517 203 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC090246.1-201ENST00000616499 426 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC121761.2-201ENST00000617300 689 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC129778.1-202ENST00000623812 261 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC116563.2-201ENST00000624751 535 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AL591379.1-207ENST00000635982 261 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 MIR4278-201ENST00000636094 69 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC103706.2-201ENST00000638080 240 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 RBPJP7-201ENST00000442803 1447 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 RBPJP5-201ENST00000449433 1447 ntBASIC4.89□□□□□ -1.63
CCDC144NLQ6NUI1 AC144833.1-201ENST00000567953 4089 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 Z99496.1-201ENST00000469424 1477 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 SNORA51.9-201ENST00000384295 124 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 RNU5A-2P-201ENST00000384337 116 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 MIR217-201ENST00000384817 110 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 AL121835.1-201ENST00000404250 354 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 RNU4-72P-201ENST00000410754 173 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC144NLQ6NUI1 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms