Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC005899.7-201ENST00000618199 588 ntBASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CDC42BPAQ5VT25 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AL161909.1-201ENST00000397390 712 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AL050305.1-201ENST00000399993 1230 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 Z98745.1-201ENST00000402553 494 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AC104651.2-201ENST00000447549 528 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 RNA5SP143-201ENST00000516936 115 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AL031658.2-201ENST00000616850 651 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 RNA5SP439-201ENST00000617595 124 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AL161637.1-201ENST00000622380 412 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AC008958.1-201ENST00000511047 682 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 SNORA31.9-201ENST00000516429 84 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 HMGB1P23-201ENST00000518743 568 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AC025884.1-201ENST00000556034 378 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 AP001153.1-201ENST00000641024 338 ntBASIC6.87□□□□□ -1.31
CDC42BPAQ5VT25 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 EIF4A1P3-201ENST00000411521 244 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AL358176.3-201ENST00000420757 454 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AC015804.1-201ENST00000622935 435 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AC090506.2-201ENST00000624521 419 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 AL139254.3-201ENST00000641097 674 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 CASC19-206ENST00000641028 1430 ntBASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDC42BPAQ5VT25 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 SPRR2C-201ENST00000290702 219 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AL445189.1-201ENST00000405722 338 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 RPL21P65-201ENST00000406094 466 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 RN7SKP33-201ENST00000410942 340 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AC091979.2-201ENST00000607514 214 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 OR8B1P-202ENST00000641132 1178 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 AC239868.2-201ENST00000564237 4527 ntBASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
CDC42BPAQ5VT25 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.84□□□□□ -1.31
CDC42BPAQ5VT25 MIR331-201ENST00000362302 94 ntBASIC6.84□□□□□ -1.31
CDC42BPAQ5VT25 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDC42BPAQ5VT25 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDC42BPAQ5VT25 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms