Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPS24P8-201ENST00000431490 402 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC006335.2-201ENST00000437993 330 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC243772.1-201ENST00000451620 410 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC144530.1-201ENST00000452862 555 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 Z95152.1-201ENST00000453556 656 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC011476.1-201ENST00000466725 307 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC011411.1-201ENST00000509592 876 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC090330.1-201ENST00000588646 764 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC125494.3-201ENST00000602759 455 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC099785.1-201ENST00000605697 437 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL365181.4-201ENST00000609800 547 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 uc_338.7-201ENST00000621834 124 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AC138907.10-201ENST00000623708 983 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 AL390318.1-201ENST00000624564 687 ntBASIC5.65□□□□□ -1.5
CCDC38Q502W7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC38Q502W7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC38Q502W7 AL137100.1-201ENST00000556703 1620 ntBASIC5.65□□□□□ -1.51
CCDC38Q502W7 AL645568.2-201ENST00000432815 1337 ntBASIC5.65□□□□□ -1.51
CCDC38Q502W7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CCDC38Q502W7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.65□□□□□ -1.51
CCDC38Q502W7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC38Q502W7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC38Q502W7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC38Q502W7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC38Q502W7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC38Q502W7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 MIR375-201ENST00000362103 64 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 SNORD56.6-201ENST00000384569 71 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 PPIAP9-201ENST00000403866 498 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 AL009179.1-201ENST00000406085 265 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC211486.3-201ENST00000412694 621 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 TRGV6-201ENST00000417928 299 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 HSFY3P-201ENST00000444242 1191 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 RPS3AP15-201ENST00000483874 781 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 HMGB1P38-201ENST00000490557 577 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 CYB5AP5-201ENST00000549779 389 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC068714.1-201ENST00000559623 800 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 ATP5F1P7-201ENST00000567330 760 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 MIR4789-201ENST00000577469 82 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC108738.1-201ENST00000603703 237 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC139769.3-201ENST00000618383 175 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC024595.1-201ENST00000623088 387 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC38Q502W7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC096656.1-201ENST00000623826 1364 ntBASIC5.64□□□□□ -1.51
CCDC38Q502W7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC38Q502W7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC010329.2-201ENST00000595195 2737 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL450345.1-202ENST00000605741 3881 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms