Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL136038.1-201ENST00000497246 351 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 OR4A46P-201ENST00000527255 933 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC087477.6-201ENST00000559595 843 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 SNORA74C-1-201ENST00000580726 201 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC005840.5-201ENST00000619166 599 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC019206.1-201ENST00000621938 425 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC027279.1-201ENST00000568885 4284 ntBASIC4.31□□□□□ -1.72
CCDC58Q4VC31 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC58Q4VC31 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 RNA5SP510-201ENST00000364697 99 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MIR3074-201ENST00000384885 81 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 PPIAP13-201ENST00000434706 478 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC093414.1-201ENST00000434712 514 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AL451139.1-201ENST00000434718 346 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AL353748.1-201ENST00000440753 474 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AL451050.1-201ENST00000450126 415 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC007386.1-201ENST00000455212 582 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 RPL23AP65-201ENST00000475608 468 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC090142.2-201ENST00000483263 416 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC104971.1-201ENST00000495117 578 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 PFN1P8-201ENST00000497012 543 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 RNA5SP392-201ENST00000516905 112 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 ATP5J2P6-201ENST00000565203 266 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MIR744-201ENST00000578242 98 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MIR5010-201ENST00000582846 120 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC048341.3-201ENST00000619323 491 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC004232.3-201ENST00000622977 525 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 AC008758.3-201ENST00000507003 1829 ntBASIC4.3□□□□□ -1.72
CCDC58Q4VC31 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC58Q4VC31 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC134882.1-201ENST00000603738 1676 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 CASC19-281ENST00000642118 1554 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RHOT1P2-201ENST00000366423 333 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
CCDC58Q4VC31 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC58Q4VC31 RPL31P15-201ENST00000449770 338 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms