Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 AC020633.1-201ENST00000468439 2247 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 SNORD113.2-201ENST00000364166 89 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 AC097523.2-201ENST00000435551 652 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 AL591473.1-201ENST00000464297 313 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 AK4P6-201ENST00000505168 528 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 OR7A8P-201ENST00000595427 913 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 AL445487.1-201ENST00000415694 1580 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX7Q2KHR2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.71□□□□□ -1.49
RFX7Q2KHR2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
RFX7Q2KHR2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AL359643.1-201ENST00000404109 423 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC108463.1-201ENST00000450258 347 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC009963.2-201ENST00000453431 138 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 RN7SL385P-201ENST00000468873 276 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC015912.2-201ENST00000571053 181 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.71□□□□□ -1.5
RFX7Q2KHR2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFX7Q2KHR2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 RNU1-82P-201ENST00000390851 165 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AL592291.1-201ENST00000403830 352 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 MIR1271-201ENST00000408537 86 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC004690.1-201ENST00000418216 328 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 RPEP3-201ENST00000425462 676 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC068287.1-201ENST00000430283 295 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 TPT1P12-201ENST00000448968 492 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 OOSP1P2-201ENST00000579644 351 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC020915.5-201ENST00000596836 964 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC015804.1-201ENST00000622935 435 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AL137100.1-201ENST00000556703 1620 ntBASIC5.7□□□□□ -1.5
RFX7Q2KHR2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX7Q2KHR2 AC097063.1-201ENST00000426714 1797 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AL591848.1-201ENST00000413092 322 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 P2RY10P2-201ENST00000416730 913 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 REREP1Y-201ENST00000422655 198 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 RPS26P4-201ENST00000431743 355 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AC004938.1-201ENST00000438468 308 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 REREP2Y-201ENST00000439103 200 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.69□□□□□ -1.5
RFX7Q2KHR2 NIP7P2-201ENST00000485801 544 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 AC026979.1-201ENST00000492525 396 ntBASIC5.69□□□□□ -1.5
RFX7Q2KHR2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms