Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
HIST1H1AQ02539 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 LRRC37BP1-201ENST00000398851 714 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC004448.2-201ENST00000422360 586 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 PDSS1P1-201ENST00000422953 1114 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 BX323845.1-201ENST00000432417 179 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC092162.1-201ENST00000432828 434 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC073052.1-201ENST00000440417 714 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 FAR2P1-206ENST00000449736 709 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 RPS18P6-201ENST00000476880 458 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 RPL7L1P4-201ENST00000513004 707 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 RNA5SP497-201ENST00000516081 97 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC012339.2-201ENST00000523996 453 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC005868.1-201ENST00000536421 331 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC007066.2-202ENST00000566531 914 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC087783.2-201ENST00000605070 562 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AL512329.2-201ENST00000607350 548 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AC099494.2-201ENST00000623371 978 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 AL356121.2-201ENST00000624715 780 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 HSPA8P17-201ENST00000427029 1382 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 CASC19-255ENST00000641733 1385 ntBASIC3.74□□□□□ -1.81
HIST1H1AQ02539 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
HIST1H1AQ02539 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC017104.4-201ENST00000636283 1592 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RNA5SP183-201ENST00000362452 119 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RNU1-108P-201ENST00000362556 161 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 U3.2-201ENST00000362981 210 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RN7SKP162-201ENST00000363605 345 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AP000534.2-201ENST00000412729 568 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 QRSL1P2-201ENST00000418582 964 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 FABP7P1-201ENST00000424004 391 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 CKS1BP6-201ENST00000424932 240 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RPL12P11-201ENST00000439970 501 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RPS26P2-201ENST00000440331 348 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RPS29P9-201ENST00000440360 171 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 Z80107.2-201ENST00000445127 392 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 MTND4LP12-201ENST00000448237 295 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 OTX2P1-201ENST00000450956 354 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 HMGB1P4-201ENST00000455362 567 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RN7SL517P-201ENST00000462240 305 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RN7SL799P-201ENST00000475891 298 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RN7SL817P-201ENST00000480777 288 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC093270.2-201ENST00000486157 792 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 RPS21P4-201ENST00000487122 248 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms