Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL589647.1-201ENST00000402485 466 ntBASIC3.63□□□□□ -1.83
CCL20P78556 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.63□□□□□ -1.83
CCL20P78556 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCL20P78556 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.63□□□□□ -1.83
CCL20P78556 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.63□□□□□ -1.83
CCL20P78556 CYCSP12-201ENST00000437729 300 ntBASIC3.63□□□□□ -1.83
CCL20P78556 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.63□□□□□ -1.83
CCL20P78556 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.63□□□□□ -1.83
CCL20P78556 RPL34P20-201ENST00000442771 351 ntBASIC3.63□□□□□ -1.83
CCL20P78556 KNOP1P3-201ENST00000446933 426 ntBASIC3.63□□□□□ -1.83
CCL20P78556 EEF1B2P3-201ENST00000447718 678 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.63□□□□□ -1.83
CCL20P78556 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.63□□□□□ -1.83
CCL20P78556 AC008410.1-201ENST00000483777 339 ntBASIC3.63□□□□□ -1.83
CCL20P78556 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.63□□□□□ -1.83
CCL20P78556 VWA8P1-201ENST00000510889 176 ntBASIC3.63□□□□□ -1.83
CCL20P78556 RNA5SP43-201ENST00000516559 110 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.63□□□□□ -1.83
CCL20P78556 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.63□□□□□ -1.83
CCL20P78556 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCL20P78556 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.63□□□□□ -1.83
CCL20P78556 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.63□□□□□ -1.83
CCL20P78556 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.63□□□□□ -1.83
CCL20P78556 CD24P2-201ENST00000565486 219 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.63□□□□□ -1.83
CCL20P78556 AC068790.5-201ENST00000602741 355 ntBASIC3.63□□□□□ -1.83
CCL20P78556 IMMP1LP3-201ENST00000604197 224 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC109309.2-201ENST00000612597 332 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC090527.3-201ENST00000619041 548 ntBASIC3.63□□□□□ -1.83
CCL20P78556 RMST_9.1-201ENST00000619945 193 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC091905.2-201ENST00000623143 306 ntBASIC3.63□□□□□ -1.83
CCL20P78556 AC067931.1-201ENST00000624190 671 ntBASIC3.63□□□□□ -1.83
CCL20P78556 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.63□□□□□ -1.83
CCL20P78556 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCL20P78556 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCL20P78556 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCL20P78556 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCL20P78556 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 RN7SKP171-201ENST00000364417 303 ntBASIC3.62□□□□□ -1.83
CCL20P78556 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 HMGB3P7-201ENST00000400214 611 ntBASIC3.62□□□□□ -1.83
CCL20P78556 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 ELOCP8-201ENST00000439309 332 ntBASIC3.62□□□□□ -1.83
CCL20P78556 ELOCP15-201ENST00000442090 332 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 MTND4LP12-201ENST00000448237 295 ntBASIC3.62□□□□□ -1.83
CCL20P78556 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 HSPE1P22-201ENST00000456856 327 ntBASIC3.62□□□□□ -1.83
CCL20P78556 RPL23AP56-201ENST00000460778 453 ntBASIC3.62□□□□□ -1.83
CCL20P78556 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 AC116562.1-201ENST00000485355 781 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AC093270.2-201ENST00000486157 792 ntBASIC3.62□□□□□ -1.83
CCL20P78556 RPS26P15-201ENST00000488067 348 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.62□□□□□ -1.83
CCL20P78556 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.62□□□□□ -1.83
CCL20P78556 AC103792.1-201ENST00000603591 919 ntBASIC3.62□□□□□ -1.83
CCL20P78556 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.62□□□□□ -1.83
CCL20P78556 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.62□□□□□ -1.83
CCL20P78556 SUGT1P3-202ENST00000604259 383 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AC010201.1-201ENST00000605051 540 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.62□□□□□ -1.83
CCL20P78556 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms