Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CL1P78423 ENSAP3-201ENST00000312710 333 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 TMSB4XP4-201ENST00000323496 618 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 RN7SKP6-201ENST00000364795 319 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 RNU4-2-201ENST00000365668 141 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CX3CL1P78423 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CX3CL1P78423 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AL031985.1-201ENST00000392713 418 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AL035419.1-201ENST00000397037 564 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 EI24P3-201ENST00000399046 1062 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AL596448.1-201ENST00000415024 392 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC007161.1-204ENST00000423039 460 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 FMO7P-201ENST00000436045 768 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AL161636.2-201ENST00000445179 927 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 NPM1P39-201ENST00000449818 867 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AL450023.1-201ENST00000450868 751 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AC144530.1-201ENST00000452862 555 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 VDAC2P4-201ENST00000452925 711 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 RPS4XP12-201ENST00000461747 709 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 RN7SL583P-201ENST00000475692 287 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 PPIAP19-201ENST00000486414 492 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 snoU109.6-201ENST00000516831 118 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 NRBF2P4-201ENST00000520874 850 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC083923.1-201ENST00000523708 376 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 OR8A2P-201ENST00000528631 952 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.4□□□□□ -1.71
CX3CL1P78423 NMNAT1P5-201ENST00000559657 841 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC027104.1-201ENST00000563702 681 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 AC034229.4-201ENST00000607861 441 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 CU639417.4-201ENST00000623928 207 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CL1P78423 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 SEC63P2-201ENST00000503863 1939 ntBASIC4.4□□□□□ -1.71
CX3CL1P78423 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CL1P78423 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CL1P78423 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CL1P78423 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CX3CL1P78423 RNU1-146P-201ENST00000364015 165 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 RN7SKP15-201ENST00000364742 309 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 RPSAP35-201ENST00000413753 818 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 OR6E1P-201ENST00000414424 923 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 TNPO1P1-201ENST00000423641 1138 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 YWHAEP5-201ENST00000431545 765 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 OR6D1P-201ENST00000436165 939 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 SEPT14P24-201ENST00000447236 180 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 YWHAEP1-201ENST00000453697 763 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AZGP1P2-201ENST00000454506 345 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC005229.2-201ENST00000456995 399 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 TRAV31-201ENST00000502780 342 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms