Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SL214P-201ENST00000487317 265 ntBASIC5.26□□□□□ -1.57
TPM4P67936 AC025164.1-201ENST00000496249 478 ntBASIC5.26□□□□□ -1.57
TPM4P67936 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.26□□□□□ -1.57
TPM4P67936 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.26□□□□□ -1.57
TPM4P67936 KCTD9P6-201ENST00000522306 950 ntBASIC5.26□□□□□ -1.57
TPM4P67936 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM4P67936 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.26□□□□□ -1.57
TPM4P67936 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM4P67936 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.26□□□□□ -1.57
TPM4P67936 NDUFA5P11-201ENST00000567995 343 ntBASIC5.26□□□□□ -1.57
TPM4P67936 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.26□□□□□ -1.57
TPM4P67936 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.26□□□□□ -1.57
TPM4P67936 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.26□□□□□ -1.57
TPM4P67936 CR381572.2-201ENST00000624852 397 ntBASIC5.26□□□□□ -1.57
TPM4P67936 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TPM4P67936 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.26□□□□□ -1.57
TPM4P67936 ZFRP1-201ENST00000457579 2970 ntBASIC5.26□□□□□ -1.57
TPM4P67936 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TPM4P67936 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TPM4P67936 Z98755.1-201ENST00000407015 1384 ntBASIC5.26□□□□□ -1.57
TPM4P67936 AC006971.1-201ENST00000407916 4486 ntBASIC5.26□□□□□ -1.57
TPM4P67936 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM4P67936 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM4P67936 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TPM4P67936 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TPM4P67936 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 AC099654.2-201ENST00000433031 1980 ntBASIC5.25□□□□□ -1.57
TPM4P67936 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TPM4P67936 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.25□□□□□ -1.57
TPM4P67936 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TPM4P67936 MIR448-201ENST00000362131 111 ntBASIC5.25□□□□□ -1.57
TPM4P67936 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TPM4P67936 RPL35AP24-201ENST00000413846 330 ntBASIC5.25□□□□□ -1.57
TPM4P67936 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.25□□□□□ -1.57
TPM4P67936 OR52B5P-201ENST00000435337 951 ntBASIC5.25□□□□□ -1.57
TPM4P67936 PRPF38AP2-201ENST00000438179 851 ntBASIC5.25□□□□□ -1.57
TPM4P67936 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.25□□□□□ -1.57
TPM4P67936 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 RNA5SP392-201ENST00000516905 112 ntBASIC5.25□□□□□ -1.57
TPM4P67936 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 AC091178.1-203ENST00000584586 279 ntBASIC5.25□□□□□ -1.57
TPM4P67936 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.25□□□□□ -1.57
TPM4P67936 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 OR7A19P-201ENST00000608051 733 ntBASIC5.25□□□□□ -1.57
TPM4P67936 AF117829.2-201ENST00000619538 361 ntBASIC5.25□□□□□ -1.57
TPM4P67936 AP001005.3-201ENST00000622049 129 ntBASIC5.25□□□□□ -1.57
TPM4P67936 OR52B5P-202ENST00000641118 1110 ntBASIC5.25□□□□□ -1.57
TPM4P67936 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TPM4P67936 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TPM4P67936 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TPM4P67936 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.24□□□□□ -1.57
TPM4P67936 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TPM4P67936 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TPM4P67936 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM4P67936 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM4P67936 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM4P67936 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TPM4P67936 RNA5SP428-201ENST00000365129 132 ntBASIC5.24□□□□□ -1.57
TPM4P67936 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM4P67936 CDY17P-201ENST00000414121 1282 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM4P67936 RPL23AP25-201ENST00000430973 463 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC093414.1-201ENST00000434712 514 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.24□□□□□ -1.57
TPM4P67936 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM4P67936 RPL5P30-201ENST00000465511 891 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM4P67936 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM4P67936 RNU1-6P-201ENST00000516290 144 ntBASIC5.24□□□□□ -1.57
TPM4P67936 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.24□□□□□ -1.57
TPM4P67936 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.24□□□□□ -1.57
TPM4P67936 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM4P67936 AC209154.1-201ENST00000582156 337 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC008759.1-201ENST00000589783 983 ntBASIC5.24□□□□□ -1.57
TPM4P67936 RPL7P50-201ENST00000600588 727 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC124856.1-201ENST00000600819 896 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC015813.4-201ENST00000610469 179 ntBASIC5.24□□□□□ -1.57
TPM4P67936 AC008115.4-201ENST00000619780 775 ntBASIC5.24□□□□□ -1.57
TPM4P67936 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TPM4P67936 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM4P67936 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TPM4P67936 MTND4P26-201ENST00000415971 1359 ntBASIC5.24□□□□□ -1.57
TPM4P67936 CR382285.2-201ENST00000624662 1495 ntBASIC5.24□□□□□ -1.57
TPM4P67936 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TPM4P67936 AC093775.1-201ENST00000624154 1868 ntBASIC5.24□□□□□ -1.57
TPM4P67936 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms