Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AP002981.1-201ENST00000517692 975 ntBASIC5.41□□□□□ -1.54
VCPP55072 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.41□□□□□ -1.54
VCPP55072 AC103792.1-201ENST00000603591 919 ntBASIC5.41□□□□□ -1.54
VCPP55072 AC011453.2-201ENST00000603737 729 ntBASIC5.41□□□□□ -1.54
VCPP55072 AL627230.1-201ENST00000613077 211 ntBASIC5.41□□□□□ -1.54
VCPP55072 AL591926.8-201ENST00000616876 211 ntBASIC5.41□□□□□ -1.54
VCPP55072 AL359757.1-201ENST00000623176 255 ntBASIC5.41□□□□□ -1.54
VCPP55072 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
VCPP55072 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VCPP55072 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VCPP55072 AC093591.2-201ENST00000565254 3843 ntBASIC5.41□□□□□ -1.54
VCPP55072 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VCPP55072 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VCPP55072 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 MFSD8-220ENST00000641243 1422 ntBASIC5.4□□□□□ -1.54
VCPP55072 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VCPP55072 RNA5SP388-201ENST00000362584 119 ntBASIC5.4□□□□□ -1.54
VCPP55072 RNU1-74P-201ENST00000384108 171 ntBASIC5.4□□□□□ -1.54
VCPP55072 RNU6-1263P-201ENST00000384601 106 ntBASIC5.4□□□□□ -1.54
VCPP55072 AC098592.2-201ENST00000413158 265 ntBASIC5.4□□□□□ -1.54
VCPP55072 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VCPP55072 AL161722.2-201ENST00000434731 981 ntBASIC5.4□□□□□ -1.54
VCPP55072 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 CYCSP24-201ENST00000445119 316 ntBASIC5.4□□□□□ -1.54
VCPP55072 RPL10P17-201ENST00000453852 316 ntBASIC5.4□□□□□ -1.54
VCPP55072 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.4□□□□□ -1.54
VCPP55072 AC009643.1-201ENST00000532030 391 ntBASIC5.4□□□□□ -1.54
VCPP55072 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.4□□□□□ -1.54
VCPP55072 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.4□□□□□ -1.54
VCPP55072 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.4□□□□□ -1.54
VCPP55072 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VCPP55072 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.4□□□□□ -1.54
VCPP55072 AP001521.2-201ENST00000608772 546 ntBASIC5.4□□□□□ -1.54
VCPP55072 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VCPP55072 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.4□□□□□ -1.55
VCPP55072 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VCPP55072 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.55
VCPP55072 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VCPP55072 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VCPP55072 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VCPP55072 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
VCPP55072 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.4□□□□□ -1.55
VCPP55072 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VCPP55072 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.4□□□□□ -1.55
VCPP55072 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VCPP55072 SDAD1P1-202ENST00000524156 2051 ntBASIC5.39□□□□□ -1.55
VCPP55072 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VCPP55072 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 AC093775.1-201ENST00000624154 1868 ntBASIC5.39□□□□□ -1.55
VCPP55072 PCAT14-202ENST00000627127 3935 ntBASIC5.39□□□□□ -1.55
VCPP55072 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VCPP55072 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
VCPP55072 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VCPP55072 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.39□□□□□ -1.55
VCPP55072 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VCPP55072 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VCPP55072 VDAC2P1-201ENST00000399358 958 ntBASIC5.39□□□□□ -1.55
VCPP55072 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.39□□□□□ -1.55
VCPP55072 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.39□□□□□ -1.55
VCPP55072 RAB9AP5-201ENST00000437794 597 ntBASIC5.39□□□□□ -1.55
VCPP55072 RAB9AP2-201ENST00000443911 597 ntBASIC5.39□□□□□ -1.55
VCPP55072 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.39□□□□□ -1.55
VCPP55072 NDUFA5P8-201ENST00000449019 346 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms