Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.2□□□□□ -1.58
ATXN3P54252 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.2□□□□□ -1.58
ATXN3P54252 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.2□□□□□ -1.58
ATXN3P54252 NDUFA5P8-201ENST00000449019 346 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AC104634.1-201ENST00000452720 462 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 IMPA1P1-201ENST00000510718 842 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.2□□□□□ -1.58
ATXN3P54252 OR7E10P-201ENST00000526420 991 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.2□□□□□ -1.58
ATXN3P54252 LSM3P2-201ENST00000551246 273 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 AC234771.5-201ENST00000600161 514 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 BMS1P7-201ENST00000602440 1052 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AC084373.1-201ENST00000603311 235 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AL031320.1-201ENST00000604177 357 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AC034236.3-201ENST00000605999 461 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 AC009704.2-201ENST00000618739 483 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 AC135068.12-201ENST00000637370 931 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATXN3P54252 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ATXN3P54252 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
ATXN3P54252 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATXN3P54252 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATXN3P54252 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
ATXN3P54252 MT-TP-201ENST00000387461 68 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 AL356967.1-201ENST00000406305 431 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 OR2AM1P-201ENST00000422137 422 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 OR6K4P-201ENST00000423179 955 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.19□□□□□ -1.58
ATXN3P54252 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATXN3P54252 RN7SL385P-201ENST00000468873 276 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 RPL37AP8-201ENST00000494116 276 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 snoU109.6-201ENST00000516831 118 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 SCARNA20.4-201ENST00000516969 131 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.19□□□□□ -1.58
ATXN3P54252 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 MTCYBP13-201ENST00000578634 1093 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.19□□□□□ -1.58
ATXN3P54252 AC112694.2-201ENST00000623697 768 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 AC063976.2-201ENST00000425667 3556 ntBASIC5.19□□□□□ -1.58
ATXN3P54252 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATXN3P54252 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
ATXN3P54252 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATXN3P54252 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
ATXN3P54252 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATXN3P54252 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATXN3P54252 PCAT14-202ENST00000627127 3935 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ATXN3P54252 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATXN3P54252 SNORA62-201ENST00000365493 153 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.18□□□□□ -1.58
ATXN3P54252 RNA5SP87-201ENST00000384155 118 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 Z97832.1-201ENST00000402490 328 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 RPS16P5-201ENST00000406501 404 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 RNU6-564P-201ENST00000410983 104 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 CHEK2P3-201ENST00000416118 248 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.18□□□□□ -1.58
ATXN3P54252 MAPRE1P3-201ENST00000435438 796 ntBASIC5.18□□□□□ -1.58
ATXN3P54252 SCAND3P1-201ENST00000439854 1060 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms