Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 MARK2P10-201ENST00000454959 1437 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 RNY1P16-201ENST00000363063 111 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 Y_RNA.105-201ENST00000363182 111 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 Y_RNA.170-201ENST00000363746 110 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 SNORA58.1-201ENST00000364133 136 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AMMECR1LP1-201ENST00000415152 841 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 SYF2P2-201ENST00000417620 583 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 RPL23AP38-201ENST00000423801 469 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC244505.2-201ENST00000435089 759 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 RN7SL89P-201ENST00000480252 283 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC098869.1-201ENST00000481627 292 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.31□□□□□ -1.08
NUBP1P53384 AC113208.1-201ENST00000497944 318 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 AC092436.3-201ENST00000511788 257 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR2-1-201ENST00000514060 354 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV2-38-201ENST00000517443 247 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC060775.1-201ENST00000518241 520 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC022559.1-201ENST00000520905 205 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 DEFB108E-201ENST00000524692 240 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 STX3-204ENST00000530221 534 ntTSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 AC007342.5-201ENST00000571340 2142 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 RN7SL131P-201ENST00000579043 256 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC093227.2-201ENST00000589357 285 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR2-118-201ENST00000603238 347 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 AC006023.2-201ENST00000609916 167 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 DLEU2_2.2-201ENST00000615474 90 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.31□□□□□ -1.08
NUBP1P53384 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
NUBP1P53384 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NUBP1P53384 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC8.31□□□□□ -1.08
NUBP1P53384 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NUBP1P53384 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 FGD3-201ENST00000337352 3303 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.3□□□□□ -1.08
NUBP1P53384 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NUBP1P53384 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NUBP1P53384 RNU6-1266P-201ENST00000362794 105 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 RN7SKP173-201ENST00000362821 315 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 Y_RNA.151-201ENST00000363566 112 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 RNU6-715P-201ENST00000365204 103 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.3□□□□□ -1.08
NUBP1P53384 RNU6-121P-201ENST00000410525 99 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 RNA5SP111-201ENST00000411386 101 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.3□□□□□ -1.08
NUBP1P53384 AC008155.1-201ENST00000421078 329 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC8.3□□□□□ -1.08
NUBP1P53384 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
NUBP1P53384 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.3□□□□□ -1.08
NUBP1P53384 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC8.3□□□□□ -1.08
NUBP1P53384 PPIAP13-201ENST00000434706 478 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 AL445928.1-201ENST00000435545 222 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.3□□□□□ -1.08
NUBP1P53384 AC092634.4-203ENST00000451395 448 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 RNU7-187P-201ENST00000458985 68 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 RN7SL761P-201ENST00000463259 278 ntBASIC8.3□□□□□ -1.08
NUBP1P53384 AP001086.1-201ENST00000494882 321 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms