Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC097484.1-201ENST00000471148 389 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 RPL7P41-201ENST00000485823 957 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.13□□□□□ -1.59
CLCNKAP51800 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC124856.1-201ENST00000600819 896 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC004241.3-201ENST00000611728 517 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 AC068870.2-201ENST00000620635 389 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLCNKAP51800 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLCNKAP51800 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.13□□□□□ -1.59
CLCNKAP51800 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 HSPA8P18-201ENST00000439846 1928 ntBASIC5.13□□□□□ -1.59
CLCNKAP51800 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLCNKAP51800 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC010132.2-201ENST00000295493 1043 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AL645927.1-201ENST00000396783 406 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 GSTA12P-201ENST00000402398 508 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC211486.3-201ENST00000412694 621 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 EI24P4-201ENST00000423683 1078 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.12□□□□□ -1.59
CLCNKAP51800 RPS29P10-201ENST00000439197 166 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AL645638.1-201ENST00000440519 361 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 MOB1AP2-201ENST00000446060 614 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AL589765.3-201ENST00000446084 462 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AL591363.1-201ENST00000450091 483 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 TVP23BP2-201ENST00000455082 615 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 RN7SL329P-201ENST00000467740 299 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 BX284632.1-201ENST00000478218 541 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 RPSAP50-201ENST00000481955 852 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 HAUS1P1-201ENST00000505275 832 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 OR5M14P-201ENST00000506803 618 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AC021193.1-201ENST00000511607 420 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 RNU6-513P-201ENST00000516104 104 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCNKAP51800 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCNKAP51800 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC044860.2-201ENST00000561005 179 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 SULT1C2P2-201ENST00000562517 294 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 MIR3691-201ENST00000578066 90 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 RN7SL708P-201ENST00000580952 299 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.12□□□□□ -1.59
CLCNKAP51800 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 RPAP2P1-201ENST00000603626 1168 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AF129408.1-201ENST00000608767 431 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AC016597.2-201ENST00000613256 341 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 AL445528.2-201ENST00000620582 470 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CLCNKAP51800 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 SCARNA15-201ENST00000607520 4325 ntBASIC5.12□□□□□ -1.59
CLCNKAP51800 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms