Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 FAR2P4-202ENST00000425399 584 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.49□□□□□ -1.37
MRE11P49959 HSPE1P16-201ENST00000426640 348 ntBASIC6.49□□□□□ -1.37
MRE11P49959 HSPD1P12-201ENST00000429127 1069 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC094019.1-201ENST00000434678 472 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC096638.2-201ENST00000434965 711 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 FABP5P3-201ENST00000437960 408 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.49□□□□□ -1.37
MRE11P49959 AC073909.1-201ENST00000447112 999 ntBASIC6.49□□□□□ -1.37
MRE11P49959 FAR2P1-206ENST00000449736 709 ntBASIC6.49□□□□□ -1.37
MRE11P49959 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.49□□□□□ -1.37
MRE11P49959 RPL35AP28-201ENST00000459730 331 ntBASIC6.49□□□□□ -1.37
MRE11P49959 NAP1L1P3-201ENST00000462291 880 ntBASIC6.49□□□□□ -1.37
MRE11P49959 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 RN7SL466P-201ENST00000497546 295 ntBASIC6.49□□□□□ -1.37
MRE11P49959 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.49□□□□□ -1.37
MRE11P49959 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.49□□□□□ -1.37
MRE11P49959 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 MTCYBP33-201ENST00000575007 1130 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.49□□□□□ -1.37
MRE11P49959 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.49□□□□□ -1.37
MRE11P49959 AC104695.2-201ENST00000605056 775 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC099785.1-201ENST00000605697 437 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC093673.2-201ENST00000609674 331 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC096586.1-201ENST00000610267 561 ntBASIC6.49□□□□□ -1.37
MRE11P49959 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 AC098679.4-201ENST00000624241 654 ntBASIC6.49□□□□□ -1.37
MRE11P49959 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MRE11P49959 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
MRE11P49959 AC106872.5-201ENST00000508856 1416 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC020633.1-201ENST00000468439 2247 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC093849.1-201ENST00000563631 2209 ntBASIC6.49□□□□□ -1.37
MRE11P49959 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 TMSB4XP2-201ENST00000335179 210 ntBASIC6.48□□□□□ -1.37
MRE11P49959 RNU5B-4P-201ENST00000363508 111 ntBASIC6.48□□□□□ -1.37
MRE11P49959 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 MIR550A3-201ENST00000390735 95 ntBASIC6.48□□□□□ -1.37
MRE11P49959 SNORA79B-201ENST00000410557 148 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AC016397.1-201ENST00000412463 242 ntBASIC6.48□□□□□ -1.37
MRE11P49959 RANP4-201ENST00000413361 655 ntBASIC6.48□□□□□ -1.37
MRE11P49959 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 RPS24P7-201ENST00000416921 246 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MRE11P49959 RNF10P1-201ENST00000418589 369 ntBASIC6.48□□□□□ -1.37
MRE11P49959 RPP40P1-201ENST00000426762 456 ntBASIC6.48□□□□□ -1.37
MRE11P49959 RPL7AP49-201ENST00000429522 581 ntBASIC6.48□□□□□ -1.37
MRE11P49959 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 AL591438.1-201ENST00000433508 581 ntBASIC6.48□□□□□ -1.37
MRE11P49959 RPS7P2-201ENST00000435134 607 ntBASIC6.48□□□□□ -1.37
MRE11P49959 OR3D1P-201ENST00000438288 955 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 RPS7P3-201ENST00000443360 580 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MRE11P49959 AL133445.1-201ENST00000467051 452 ntBASIC6.48□□□□□ -1.37
MRE11P49959 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 RN7SL727P-201ENST00000482164 296 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 DUTP7-201ENST00000507982 486 ntBASIC6.48□□□□□ -1.37
MRE11P49959 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.48□□□□□ -1.37
MRE11P49959 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 RNA5SP92-201ENST00000516437 110 ntBASIC6.48□□□□□ -1.37
MRE11P49959 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.48□□□□□ -1.37
MRE11P49959 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 AL356057.1-201ENST00000533798 831 ntBASIC6.48□□□□□ -1.37
MRE11P49959 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.48□□□□□ -1.37
MRE11P49959 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.48□□□□□ -1.37
MRE11P49959 AL356801.1-201ENST00000559320 294 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.48□□□□□ -1.37
MRE11P49959 PRPF19P1-201ENST00000584766 898 ntBASIC6.48□□□□□ -1.37
MRE11P49959 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.48□□□□□ -1.37
MRE11P49959 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.48□□□□□ -1.37
MRE11P49959 AC073333.2-201ENST00000603589 769 ntBASIC6.48□□□□□ -1.37
MRE11P49959 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms