Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB2P35606 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.89□□□□□ -1.47
COPB2P35606 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB2P35606 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB2P35606 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB2P35606 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPB2P35606 AC006210.2-201ENST00000367074 1545 ntBASIC5.89□□□□□ -1.47
COPB2P35606 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.89□□□□□ -1.47
COPB2P35606 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPB2P35606 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.88□□□□□ -1.47
COPB2P35606 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 AL590139.1-201ENST00000416267 400 ntBASIC5.88□□□□□ -1.47
COPB2P35606 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 HSPD1P12-201ENST00000429127 1069 ntBASIC5.88□□□□□ -1.47
COPB2P35606 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB2P35606 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB2P35606 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 AL359265.1-201ENST00000440296 795 ntBASIC5.88□□□□□ -1.47
COPB2P35606 RAD1P2-201ENST00000446414 663 ntBASIC5.88□□□□□ -1.47
COPB2P35606 HMGB1P4-201ENST00000455362 567 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AP000942.1-201ENST00000463969 747 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC091917.2-201ENST00000505002 744 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC097173.1-201ENST00000505862 819 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC034244.2-201ENST00000514668 858 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.88□□□□□ -1.47
COPB2P35606 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB2P35606 MIR4330-201ENST00000579077 105 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB2P35606 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.88□□□□□ -1.47
COPB2P35606 AC108738.1-201ENST00000603703 237 ntBASIC5.88□□□□□ -1.47
COPB2P35606 AC131238.1-201ENST00000617135 328 ntBASIC5.88□□□□□ -1.47
COPB2P35606 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB2P35606 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB2P35606 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB2P35606 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 AC005005.4-201ENST00000623789 16698 ntBASIC5.87□□□□□ -1.47
COPB2P35606 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPB2P35606 RNVU1-6-201ENST00000364688 164 ntBASIC5.87□□□□□ -1.47
COPB2P35606 MIR192-201ENST00000384915 110 ntBASIC5.87□□□□□ -1.47
COPB2P35606 SNORA48.4-201ENST00000391089 134 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AL021331.1-201ENST00000402817 582 ntBASIC5.87□□□□□ -1.47
COPB2P35606 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 OR13Z1P-201ENST00000416141 834 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC019050.1-201ENST00000418508 492 ntBASIC5.87□□□□□ -1.47
COPB2P35606 RHOT1P3-201ENST00000436571 331 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB2P35606 RPL34P20-201ENST00000442771 351 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB2P35606 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 NIP7P2-201ENST00000485801 544 ntBASIC5.87□□□□□ -1.47
COPB2P35606 RPS12P31-201ENST00000491419 398 ntBASIC5.87□□□□□ -1.47
COPB2P35606 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 NPM1P6-201ENST00000521088 871 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB2P35606 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB2P35606 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.87□□□□□ -1.47
COPB2P35606 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 AC068993.1-201ENST00000546724 589 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC137768.1-201ENST00000549998 553 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC092868.3-201ENST00000560515 784 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 AC010200.2-201ENST00000605098 235 ntBASIC5.87□□□□□ -1.47
COPB2P35606 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 AC009704.2-201ENST00000618739 483 ntBASIC5.87□□□□□ -1.47
COPB2P35606 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPB2P35606 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB2P35606 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB2P35606 AC114546.3-201ENST00000623582 1734 ntBASIC5.87□□□□□ -1.47
COPB2P35606 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB2P35606 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms