Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTCO1P7-201ENST00000419523 1542 ntBASIC6.03□□□□□ -1.44
RFC4P35249 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 AC025031.4-201ENST00000621248 3271 ntBASIC6.03□□□□□ -1.44
RFC4P35249 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RFC4P35249 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.02□□□□□ -1.44
RFC4P35249 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
RFC4P35249 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
RFC4P35249 AP002512.4-202ENST00000641599 4530 ntBASIC6.02□□□□□ -1.45
RFC4P35249 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RFC4P35249 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.02□□□□□ -1.45
RFC4P35249 AP000756.2-201ENST00000624168 2567 ntBASIC6.02□□□□□ -1.45
RFC4P35249 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.02□□□□□ -1.45
RFC4P35249 RNA5SP453-201ENST00000362503 119 ntBASIC6.02□□□□□ -1.45
RFC4P35249 AL445213.1-201ENST00000412589 747 ntBASIC6.02□□□□□ -1.45
RFC4P35249 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.02□□□□□ -1.45
RFC4P35249 AL158827.1-201ENST00000416300 391 ntBASIC6.02□□□□□ -1.45
RFC4P35249 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 AC046176.1-201ENST00000435260 1170 ntBASIC6.02□□□□□ -1.45
RFC4P35249 RNU7-157P-201ENST00000459600 66 ntBASIC6.02□□□□□ -1.45
RFC4P35249 RN7SL558P-201ENST00000497468 299 ntBASIC6.02□□□□□ -1.45
RFC4P35249 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.02□□□□□ -1.45
RFC4P35249 AC026688.1-201ENST00000520639 1168 ntBASIC6.02□□□□□ -1.45
RFC4P35249 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.02□□□□□ -1.45
RFC4P35249 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.02□□□□□ -1.45
RFC4P35249 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 AL133338.2-201ENST00000604292 736 ntBASIC6.02□□□□□ -1.45
RFC4P35249 AC023043.4-201ENST00000612081 449 ntBASIC6.02□□□□□ -1.45
RFC4P35249 AL133243.1-201ENST00000614487 366 ntBASIC6.02□□□□□ -1.45
RFC4P35249 AP001153.1-201ENST00000641024 338 ntBASIC6.02□□□□□ -1.45
RFC4P35249 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.02□□□□□ -1.45
RFC4P35249 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.02□□□□□ -1.45
RFC4P35249 SMG1P7-201ENST00000565246 2704 ntBASIC6.02□□□□□ -1.45
RFC4P35249 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC4P35249 SMG1P6-201ENST00000532337 2930 ntBASIC6.02□□□□□ -1.45
RFC4P35249 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
RFC4P35249 ZNF137P-201ENST00000456718 1920 ntBASIC6.01□□□□□ -1.45
RFC4P35249 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RFC4P35249 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 DDX18P6-201ENST00000450119 1997 ntBASIC6.01□□□□□ -1.45
RFC4P35249 OR4K17-201ENST00000315543 1032 ntBASIC6.01□□□□□ -1.45
RFC4P35249 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 SNORA71.2-201ENST00000364941 134 ntBASIC6.01□□□□□ -1.45
RFC4P35249 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.01□□□□□ -1.45
RFC4P35249 QRSL1P2-201ENST00000418582 964 ntBASIC6.01□□□□□ -1.45
RFC4P35249 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 FHP1-201ENST00000442741 703 ntBASIC6.01□□□□□ -1.45
RFC4P35249 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.01□□□□□ -1.45
RFC4P35249 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.01□□□□□ -1.45
RFC4P35249 SNRPCP3-201ENST00000474888 476 ntBASIC6.01□□□□□ -1.45
RFC4P35249 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.01□□□□□ -1.45
RFC4P35249 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 Y_RNA.719-201ENST00000517156 106 ntBASIC6.01□□□□□ -1.45
RFC4P35249 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.01□□□□□ -1.45
RFC4P35249 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.01□□□□□ -1.45
RFC4P35249 RNF138P2-201ENST00000603490 592 ntBASIC6.01□□□□□ -1.45
RFC4P35249 AC115286.1-201ENST00000604298 434 ntBASIC6.01□□□□□ -1.45
RFC4P35249 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
RFC4P35249 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RFC4P35249 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.01□□□□□ -1.45
RFC4P35249 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6□□□□□ -1.45
RFC4P35249 RNA5SP28-201ENST00000363841 119 ntBASIC6□□□□□ -1.45
RFC4P35249 SNORA70C-201ENST00000384538 135 ntBASIC6□□□□□ -1.45
RFC4P35249 MIR23B-201ENST00000384832 97 ntBASIC6□□□□□ -1.45
RFC4P35249 MIR23A-201ENST00000385245 73 ntBASIC6□□□□□ -1.45
RFC4P35249 AL358176.3-201ENST00000420757 454 ntBASIC6□□□□□ -1.45
RFC4P35249 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6□□□□□ -1.45
RFC4P35249 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6□□□□□ -1.45
RFC4P35249 NDUFA5P1-201ENST00000433858 341 ntBASIC6□□□□□ -1.45
RFC4P35249 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6□□□□□ -1.45
RFC4P35249 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6□□□□□ -1.45
RFC4P35249 H2AFZP5-201ENST00000446960 382 ntBASIC6□□□□□ -1.45
RFC4P35249 MTND4LP2-201ENST00000502312 285 ntBASIC6□□□□□ -1.45
RFC4P35249 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6□□□□□ -1.45
RFC4P35249 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6□□□□□ -1.45
RFC4P35249 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6□□□□□ -1.45
RFC4P35249 AC011477.5-201ENST00000586571 259 ntBASIC6□□□□□ -1.45
RFC4P35249 ARF4P1-201ENST00000605447 541 ntBASIC6□□□□□ -1.45
RFC4P35249 AC012409.3-201ENST00000611343 981 ntBASIC6□□□□□ -1.45
RFC4P35249 AC114781.5-201ENST00000615297 108 ntBASIC6□□□□□ -1.45
RFC4P35249 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RFC4P35249 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms