Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC010435.1-201ENST00000623353 1177 ntBASIC4.03□□□□□ -1.76
COL8A2P25067 AP000648.2-201ENST00000624182 404 ntBASIC4.03□□□□□ -1.76
COL8A2P25067 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.03□□□□□ -1.76
COL8A2P25067 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.03□□□□□ -1.76
COL8A2P25067 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL8A2P25067 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL8A2P25067 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL8A2P25067 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.03□□□□□ -1.76
COL8A2P25067 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL8A2P25067 AL442639.1-201ENST00000625030 1899 ntBASIC4.03□□□□□ -1.77
COL8A2P25067 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL8A2P25067 FAR2P2-201ENST00000413041 594 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 FAR2P4-202ENST00000425399 584 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 AC068287.1-201ENST00000430283 295 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.02□□□□□ -1.77
COL8A2P25067 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 AC092593.2-201ENST00000513866 913 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 RN7SKP92-201ENST00000517266 244 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 AC005868.1-201ENST00000536421 331 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 RN7SL652P-201ENST00000577769 300 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 BX005214.3-202ENST00000619809 325 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 AC012414.7-202ENST00000622705 1090 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 AC021106.3-201ENST00000623925 531 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.02□□□□□ -1.77
COL8A2P25067 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
COL8A2P25067 SMG1P6-201ENST00000532337 2930 ntBASIC4.02□□□□□ -1.77
COL8A2P25067 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.02□□□□□ -1.77
COL8A2P25067 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.02□□□□□ -1.77
COL8A2P25067 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL8A2P25067 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
COL8A2P25067 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.02□□□□□ -1.77
COL8A2P25067 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 A2MP1-204ENST00000566278 4130 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AC007382.1-201ENST00000624376 2618 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.01□□□□□ -1.77
COL8A2P25067 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 AC010132.2-201ENST00000295493 1043 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 RNU6-249P-201ENST00000363016 102 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 RNU1-32P-201ENST00000363937 159 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 UBBP2-201ENST00000376781 231 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 MIR141-201ENST00000384975 95 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AL049697.2-201ENST00000403708 294 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 RPS4XP9-201ENST00000405151 780 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AC016397.1-201ENST00000412463 242 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AL136455.1-201ENST00000441083 1240 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.01□□□□□ -1.77
COL8A2P25067 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.01□□□□□ -1.77
COL8A2P25067 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.01□□□□□ -1.77
COL8A2P25067 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
COL8A2P25067 RNU1-6P-201ENST00000516290 144 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 RPL23AP53-201ENST00000521854 457 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 HNRNPRP2-201ENST00000528421 743 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.01□□□□□ -1.77
COL8A2P25067 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.01□□□□□ -1.77
COL8A2P25067 MIR4472-2-201ENST00000582069 67 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AC209154.1-201ENST00000582156 337 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.01□□□□□ -1.77
COL8A2P25067 ELOCP28-201ENST00000590044 317 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 AC068790.7-201ENST00000602347 528 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.01□□□□□ -1.77
COL8A2P25067 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COL8A2P25067 AP000542.2-201ENST00000623199 6179 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.01□□□□□ -1.77
COL8A2P25067 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.01□□□□□ -1.77
COL8A2P25067 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL8A2P25067 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 AL449283.1-201ENST00000602631 3403 ntBASIC4.01□□□□□ -1.77
COL8A2P25067 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL8A2P25067 AC126323.6-202ENST00000568092 3511 ntBASIC4□□□□□ -1.77
COL8A2P25067 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms