Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.2□□□□□ -1.26
ERCC3P19447 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.2□□□□□ -1.26
ERCC3P19447 AC010624.4-201ENST00000597606 1351 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 AC009779.8-201ENST00000641684 4384 ntBASIC7.2□□□□□ -1.26
ERCC3P19447 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ERCC3P19447 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ERCC3P19447 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 Z95114.1-201ENST00000624264 14574 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 ASNSP1-204ENST00000641977 1664 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 RNA5SP273-201ENST00000362484 113 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 SNORA51.1-201ENST00000363243 140 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 AL355379.1-201ENST00000405542 640 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 CHEK2P5-201ENST00000423877 246 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 RPL31P54-201ENST00000429803 370 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 MTCO3P21-201ENST00000430791 643 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AC008072.1-201ENST00000434254 824 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 MTCYBP39-201ENST00000437562 491 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 AL137845.2-201ENST00000444292 988 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.19□□□□□ -1.26
ERCC3P19447 RPL23AP35-201ENST00000451906 501 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AC002553.3-201ENST00000453002 341 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 PPIAP19-201ENST00000486414 492 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 RNA5SP135-201ENST00000517019 125 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 AP001207.1-201ENST00000524051 481 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.19□□□□□ -1.26
ERCC3P19447 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC115085.1-201ENST00000588924 229 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AC067852.5-201ENST00000589299 310 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 AL031985.2-201ENST00000600955 480 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.19□□□□□ -1.26
ERCC3P19447 RN7SKP299-201ENST00000606679 301 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AL008723.3-201ENST00000608926 449 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AC245014.3-201ENST00000618589 347 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AL445670.1-201ENST00000618889 801 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 MIR7159-201ENST00000620587 66 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 CDRT1-208ENST00000630868 794 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC011455.2-201ENST00000599320 3336 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 AC025809.2-201ENST00000625085 1802 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 AP001284.1-201ENST00000528393 2118 ntBASIC7.19□□□□□ -1.26
ERCC3P19447 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
ERCC3P19447 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ERCC3P19447 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.19□□□□□ -1.26
ERCC3P19447 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC3P19447 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.18□□□□□ -1.26
ERCC3P19447 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms