Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL137067.2-201ENST00000621202 131 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 LINC01808-202ENST00000641680 1116 ntBASIC7.05□□□□□ -1.28
LIG1P18858 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 TTC39DP-201ENST00000416781 1688 ntBASIC7.05□□□□□ -1.28
LIG1P18858 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 AC000367.1-201ENST00000452711 1766 ntBASIC7.05□□□□□ -1.28
LIG1P18858 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 AL137100.1-201ENST00000556703 1620 ntBASIC7.05□□□□□ -1.28
LIG1P18858 CASC19-246ENST00000641625 1606 ntBASIC7.05□□□□□ -1.28
LIG1P18858 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
LIG1P18858 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.04□□□□□ -1.28
LIG1P18858 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LIG1P18858 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 RNU6-353P-201ENST00000364266 108 ntBASIC7.04□□□□□ -1.28
LIG1P18858 Y_RNA.359-201ENST00000365498 102 ntBASIC7.04□□□□□ -1.28
LIG1P18858 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 AL121977.1-201ENST00000401636 979 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC099535.1-201ENST00000408928 371 ntBASIC7.04□□□□□ -1.28
LIG1P18858 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 AL139421.1-201ENST00000423010 169 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 CYCSP51-201ENST00000443545 318 ntBASIC7.04□□□□□ -1.28
LIG1P18858 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AC005297.1-201ENST00000444765 862 ntBASIC7.04□□□□□ -1.28
LIG1P18858 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 TIMM8BP2-201ENST00000445940 251 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 RPS20P4-201ENST00000461659 355 ntBASIC7.04□□□□□ -1.28
LIG1P18858 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 AC021006.1-201ENST00000489849 553 ntBASIC7.04□□□□□ -1.28
LIG1P18858 PGBD4P4-201ENST00000509673 613 ntBASIC7.04□□□□□ -1.28
LIG1P18858 RNU6-678P-201ENST00000516832 109 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AC013701.1-201ENST00000522657 465 ntBASIC7.04□□□□□ -1.28
LIG1P18858 NPIPB14P-203ENST00000532298 987 ntBASIC7.04□□□□□ -1.28
LIG1P18858 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.04□□□□□ -1.28
LIG1P18858 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.04□□□□□ -1.28
LIG1P18858 AC008055.1-201ENST00000547032 609 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.04□□□□□ -1.28
LIG1P18858 AC007954.1-201ENST00000554198 494 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AC079171.1-201ENST00000568788 914 ntBASIC7.04□□□□□ -1.28
LIG1P18858 RN7SL230P-201ENST00000580835 303 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.04□□□□□ -1.28
LIG1P18858 U73023.1-201ENST00000603134 700 ntBASIC7.04□□□□□ -1.28
LIG1P18858 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.04□□□□□ -1.28
LIG1P18858 AC026368.1-201ENST00000614934 690 ntBASIC7.04□□□□□ -1.28
LIG1P18858 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AL683826.1-201ENST00000624104 627 ntBASIC7.04□□□□□ -1.28
LIG1P18858 OR11H2-202ENST00000641517 1085 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 AC097063.1-201ENST00000426714 1797 ntBASIC7.04□□□□□ -1.28
LIG1P18858 AL355852.1-201ENST00000454081 1771 ntBASIC7.04□□□□□ -1.28
LIG1P18858 NLRP3P1-201ENST00000622303 1785 ntBASIC7.04□□□□□ -1.28
LIG1P18858 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 AC027575.3-201ENST00000583058 2747 ntBASIC7.04□□□□□ -1.28
LIG1P18858 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.04□□□□□ -1.28
LIG1P18858 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.04□□□□□ -1.28
LIG1P18858 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LIG1P18858 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.03□□□□□ -1.28
LIG1P18858 AC019072.1-201ENST00000604535 1551 ntBASIC7.03□□□□□ -1.28
LIG1P18858 CR848007.1-201ENST00000442354 1699 ntBASIC7.03□□□□□ -1.28
LIG1P18858 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.03□□□□□ -1.28
LIG1P18858 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LIG1P18858 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LIG1P18858 AC232271.1-201ENST00000602455 2715 ntBASIC7.03□□□□□ -1.28
LIG1P18858 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LIG1P18858 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LIG1P18858 KARSP1-201ENST00000451871 1752 ntBASIC7.03□□□□□ -1.28
LIG1P18858 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LIG1P18858 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.03□□□□□ -1.28
LIG1P18858 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms