Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.82□□□□□ -1.16
CFTRP13569 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 RN7SKP33-201ENST00000410942 340 ntBASIC7.82□□□□□ -1.16
CFTRP13569 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.82□□□□□ -1.16
CFTRP13569 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.82□□□□□ -1.16
CFTRP13569 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.82□□□□□ -1.16
CFTRP13569 uc_338.13-201ENST00000618243 179 ntBASIC7.82□□□□□ -1.16
CFTRP13569 AC018628.1-201ENST00000624147 3819 ntBASIC7.82□□□□□ -1.16
CFTRP13569 AC067931.1-201ENST00000624190 671 ntBASIC7.82□□□□□ -1.16
CFTRP13569 AC006065.6-201ENST00000625201 545 ntBASIC7.82□□□□□ -1.16
CFTRP13569 TMEM30CP-203ENST00000637814 1035 ntBASIC7.82□□□□□ -1.16
CFTRP13569 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CFTRP13569 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CFTRP13569 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CFTRP13569 TRIM51GP-201ENST00000534741 1350 ntBASIC7.82□□□□□ -1.16
CFTRP13569 MIR554-201ENST00000384874 96 ntBASIC7.81□□□□□ -1.16
CFTRP13569 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 AL935212.3-201ENST00000450729 284 ntBASIC7.81□□□□□ -1.16
CFTRP13569 AC098799.3-201ENST00000506095 438 ntBASIC7.81□□□□□ -1.16
CFTRP13569 AC109635.6-201ENST00000525487 1113 ntBASIC7.81□□□□□ -1.16
CFTRP13569 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.81□□□□□ -1.16
CFTRP13569 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.81□□□□□ -1.16
CFTRP13569 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.81□□□□□ -1.16
CFTRP13569 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC7.81□□□□□ -1.16
CFTRP13569 OR2L1P-202ENST00000641567 1023 ntBASIC7.81□□□□□ -1.16
CFTRP13569 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.81□□□□□ -1.16
CFTRP13569 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CFTRP13569 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CFTRP13569 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CFTRP13569 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 UBBP2-201ENST00000376781 231 ntBASIC7.81□□□□□ -1.16
CFTRP13569 SNORA11F-201ENST00000408237 128 ntBASIC7.81□□□□□ -1.16
CFTRP13569 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.81□□□□□ -1.16
CFTRP13569 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CFTRP13569 RGS17P1-201ENST00000423358 553 ntBASIC7.81□□□□□ -1.16
CFTRP13569 AL117339.2-201ENST00000430475 180 ntBASIC7.81□□□□□ -1.16
CFTRP13569 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 AC005868.1-201ENST00000536421 331 ntBASIC7.81□□□□□ -1.16
CFTRP13569 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 AL356863.1-201ENST00000623378 1080 ntBASIC7.81□□□□□ -1.16
CFTRP13569 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
CFTRP13569 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.8□□□□□ -1.16
CFTRP13569 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
CFTRP13569 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 AL158163.1-201ENST00000603915 1649 ntBASIC7.8□□□□□ -1.16
CFTRP13569 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.8□□□□□ -1.16
CFTRP13569 DHX9P1-201ENST00000436565 3076 ntBASIC7.8□□□□□ -1.16
CFTRP13569 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.8□□□□□ -1.16
CFTRP13569 RN7SL132P-201ENST00000478131 296 ntBASIC7.8□□□□□ -1.16
CFTRP13569 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.8□□□□□ -1.16
CFTRP13569 HNRNPCP4-201ENST00000571636 900 ntBASIC7.8□□□□□ -1.16
CFTRP13569 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.8□□□□□ -1.16
CFTRP13569 AL360270.2-201ENST00000562952 5985 ntBASIC7.8□□□□□ -1.16
CFTRP13569 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 AL591135.1-201ENST00000401578 5914 ntBASIC7.8□□□□□ -1.16
CFTRP13569 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.8□□□□□ -1.16
CFTRP13569 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.8□□□□□ -1.16
CFTRP13569 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CFTRP13569 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CFTRP13569 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 AC006326.1-201ENST00000445465 787 ntBASIC7.79□□□□□ -1.16
CFTRP13569 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 RPL5P32-201ENST00000454085 879 ntBASIC7.79□□□□□ -1.16
CFTRP13569 RPL23AP2-201ENST00000471227 466 ntBASIC7.79□□□□□ -1.16
CFTRP13569 VN1R105P-201ENST00000486595 910 ntBASIC7.79□□□□□ -1.16
CFTRP13569 AC090058.1-201ENST00000498788 435 ntBASIC7.79□□□□□ -1.16
CFTRP13569 AC023632.4-201ENST00000517783 191 ntBASIC7.79□□□□□ -1.16
CFTRP13569 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.79□□□□□ -1.16
CFTRP13569 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.79□□□□□ -1.16
CFTRP13569 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.79□□□□□ -1.16
CFTRP13569 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC7.79□□□□□ -1.16
CFTRP13569 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CFTRP13569 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms