Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC021205.1-201ENST00000468797 348 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC104971.1-201ENST00000495117 578 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 MYL12BP2-201ENST00000503948 512 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC106800.2-201ENST00000514009 1103 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 YWHABP2-201ENST00000540201 713 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC004217.3-201ENST00000551552 878 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC044913.1-201ENST00000557200 430 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 ANKRD36BP2-206ENST00000575193 1245 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AL589674.2-201ENST00000604304 337 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC006270.3-201ENST00000605967 1036 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC008945.2-201ENST00000606056 604 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC099676.1-201ENST00000608886 657 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 DLEU2_1.1-201ENST00000612089 120 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC010678.1-201ENST00000614118 713 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 DLEU2_1.2-201ENST00000614667 120 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC011472.4-201ENST00000615848 491 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC016717.3-201ENST00000624730 554 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 MFSD8-245ENST00000641743 948 ntBASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CSB-PGBD3P0DP91 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC024587.1-201ENST00000505925 2157 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 CASC19-206ENST00000641028 1430 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 PDZK1P1-202ENST00000425209 1350 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 MIR375-201ENST00000362103 64 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 HMGN1P14-201ENST00000412459 517 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AL713922.1-201ENST00000416477 747 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 MTCYBP34-201ENST00000439552 670 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 IGBP1P3-201ENST00000447449 1000 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 FCF1P3-201ENST00000496394 590 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 RPL37P25-201ENST00000507308 276 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC005178.1-201ENST00000508392 440 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 SNORA70.20-201ENST00000516848 126 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 IGLV2-28-201ENST00000520681 304 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC008429.4-201ENST00000521201 182 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 OR5BC1P-201ENST00000529327 739 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC091078.2-201ENST00000557145 559 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC010547.6-201ENST00000571789 193 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 FAM27E4-201ENST00000605259 342 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AP000238.1-201ENST00000608759 426 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC009120.7-201ENST00000623452 780 ntBASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CSB-PGBD3P0DP91 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.11
CSB-PGBD3P0DP91 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
CSB-PGBD3P0DP91 AP003119.3-201ENST00000566747 4192 ntBASIC8.15□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms