Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC4P09017 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 VN1R37P-201ENST00000419096 748 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 GLUD1P9-201ENST00000420997 1173 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 MTND6P5-201ENST00000448266 512 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC4P09017 GYG1P1-201ENST00000460864 698 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 RN7SL738P-201ENST00000470264 297 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC4P09017 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 RN7SL205P-201ENST00000490174 284 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC4P09017 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC4P09017 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC4P09017 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC4P09017 RN7SL52P-201ENST00000584271 284 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 AC019193.2-201ENST00000610012 634 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 RN7SL722P-201ENST00000617780 284 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 RN7SL565P-201ENST00000618246 284 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC4P09017 AC021106.3-201ENST00000623925 531 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC4P09017 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 CR382285.2-201ENST00000624662 1495 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 HCFC2P1-201ENST00000392864 1592 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HOXC4P09017 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC4P09017 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC4P09017 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 AL031595.2-201ENST00000624215 19071 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC4P09017 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC4P09017 AC092111.2-201ENST00000611627 1414 ntBASIC4.72□□□□□ -1.65
HOXC4P09017 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXC4P09017 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
HOXC4P09017 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXC4P09017 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HOXC4P09017 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
HOXC4P09017 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.71□□□□□ -1.65
HOXC4P09017 AL442639.1-201ENST00000625030 1899 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC4P09017 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 SNORA56-201ENST00000383966 129 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 SNORA70F-201ENST00000384142 135 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC4P09017 RN7SKP267-201ENST00000410381 285 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 SMC4P1-201ENST00000414479 527 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 AL691447.1-201ENST00000419456 387 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 AC104333.2-201ENST00000422630 192 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC073358.1-201ENST00000505671 684 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC4P09017 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC4P09017 AL133406.3-201ENST00000606817 541 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 AL451049.1-201ENST00000608672 497 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 MIR7703-201ENST00000620784 77 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC4P09017 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HOXC4P09017 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HOXC4P09017 DHX40P1-201ENST00000588725 1412 ntBASIC4.71□□□□□ -1.66
HOXC4P09017 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC4P09017 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 AC063976.2-201ENST00000425667 3556 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC4P09017 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 CDC27P2-201ENST00000425026 1922 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC4P09017 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms