Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 RNU4-4P-201ENST00000364588 130 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
OPN1SWP03999 HMGB3P7-201ENST00000400214 611 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.36□□□□□ -1.71
OPN1SWP03999 AL589647.1-201ENST00000402485 466 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 SPTLC1P2-201ENST00000407089 121 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 GLUD1P9-201ENST00000420997 1173 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 PPIAP13-201ENST00000434706 478 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 AC112498.1-201ENST00000444401 332 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 AL589765.3-201ENST00000446084 462 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 AC005532.2-201ENST00000467154 373 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 RN7SL727P-201ENST00000482164 296 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 NPM1P29-201ENST00000483112 803 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 OR10G5P-201ENST00000532733 358 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 GSTP1P1-201ENST00000548078 319 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 AC026979.4-201ENST00000606555 645 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 OR7A19P-201ENST00000608051 733 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 AP001521.2-201ENST00000608772 546 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 AC009163.6-201ENST00000612367 342 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
OPN1SWP03999 CR383656.5-201ENST00000547616 1340 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
OPN1SWP03999 AL442639.1-201ENST00000625030 1899 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
OPN1SWP03999 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
OPN1SWP03999 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
OPN1SWP03999 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
OPN1SWP03999 AP001002.1-201ENST00000625148 1513 ntBASIC4.36□□□□□ -1.71
OPN1SWP03999 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
OPN1SWP03999 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AL031119.1-201ENST00000404707 1879 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 OR56B2P-201ENST00000317102 954 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.35□□□□□ -1.71
OPN1SWP03999 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
OPN1SWP03999 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 SEPT7P8-201ENST00000413308 775 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 AC114755.2-201ENST00000413520 361 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 AC093162.1-201ENST00000419682 124 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 PTMAP6-201ENST00000439110 327 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC004815.1-201ENST00000484185 331 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 HAUS8P1-201ENST00000549005 542 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AC140113.4-201ENST00000622087 222 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 AC004232.3-201ENST00000622977 525 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 CR381572.2-201ENST00000624852 397 ntBASIC4.35□□□□□ -1.71
OPN1SWP03999 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.35□□□□□ -1.71
OPN1SWP03999 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.35□□□□□ -1.71
OPN1SWP03999 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
OPN1SWP03999 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
OPN1SWP03999 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
OPN1SWP03999 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
OPN1SWP03999 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
OPN1SWP03999 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
OPN1SWP03999 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.34□□□□□ -1.71
OPN1SWP03999 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
OPN1SWP03999 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
OPN1SWP03999 RNU1-20P-201ENST00000363314 162 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 BMS1P3-201ENST00000372011 932 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 VDAC2P1-201ENST00000399358 958 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 OR51B3P-201ENST00000412287 913 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 RPL12P43-201ENST00000420608 499 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.34□□□□□ -1.71
OPN1SWP03999 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
OPN1SWP03999 RPL21P43-201ENST00000425440 472 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.34□□□□□ -1.71
OPN1SWP03999 EEF1B2P5-201ENST00000444820 548 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.34□□□□□ -1.71
OPN1SWP03999 AURKAPS2-201ENST00000454983 333 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 RPL32P9-201ENST00000487963 407 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 AC109462.1-201ENST00000491087 368 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.34□□□□□ -1.71
OPN1SWP03999 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
OPN1SWP03999 AC021146.3-201ENST00000511911 260 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
OPN1SWP03999 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.34□□□□□ -1.71
OPN1SWP03999 BUD31P1-201ENST00000521828 359 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms