Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFBP01127 SCARNA20.4-201ENST00000516969 131 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC133555.2-201ENST00000550213 292 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC087888.1-201ENST00000550884 1254 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 GLRXP2-201ENST00000555594 321 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 AC034105.4-201ENST00000568304 277 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 MTATP6P25-201ENST00000574491 261 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 MIR3939-201ENST00000582614 106 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC010487.1-201ENST00000594408 1172 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
PDGFBP01127 AP001267.4-201ENST00000602598 545 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 AC023813.4-201ENST00000607580 580 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.12□□□□□ -1.59
PDGFBP01127 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 AC011944.2-201ENST00000624440 683 ntBASIC5.12□□□□□ -1.59
PDGFBP01127 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.12□□□□□ -1.59
PDGFBP01127 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFBP01127 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDGFBP01127 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFBP01127 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 RNU6-618P-201ENST00000363518 112 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 GNG5P2-201ENST00000372054 207 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 MIR129-1-201ENST00000384972 72 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 RPL32P23-201ENST00000397237 405 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 ST13P16-201ENST00000401760 781 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 RSU1P3-201ENST00000412878 835 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AL591848.1-201ENST00000413092 322 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 BX510359.2-201ENST00000417920 305 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 RPL12P34-201ENST00000424532 479 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 MTCO1P45-201ENST00000431457 267 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AC097523.2-201ENST00000435551 652 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFBP01127 CBX1P1-201ENST00000440184 427 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFBP01127 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 RN7SL188P-201ENST00000469842 285 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 AC023424.1-201ENST00000496058 459 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFBP01127 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 AC026688.1-201ENST00000520639 1168 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 NPM1P6-201ENST00000521088 871 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AC138701.1-201ENST00000524329 714 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 MIR4429-201ENST00000580105 73 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 EIF1P5-201ENST00000585002 234 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.11□□□□□ -1.59
PDGFBP01127 AC084373.1-201ENST00000603311 235 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AC020658.4-201ENST00000613987 684 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AL356274.1-201ENST00000617064 410 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 AL391597.1-201ENST00000618707 694 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 MTCO1P8-201ENST00000416914 1523 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 AC005005.4-201ENST00000623789 16698 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFBP01127 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDGFBP01127 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFBP01127 SPATA2P1-201ENST00000431223 2055 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFBP01127 SCARNA15-201ENST00000607520 4325 ntBASIC5.11□□□□□ -1.59
PDGFBP01127 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.11□□□□□ -1.59
PDGFBP01127 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFBP01127 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDGFBP01127 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDGFBP01127 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFBP01127 SNORA11C-201ENST00000408532 129 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFBP01127 GTF2IP5-201ENST00000414608 731 ntBASIC5.1□□□□□ -1.59
PDGFBP01127 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms