Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC079168.1-201ENST00000458741 345 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 SIAH1P1-201ENST00000479411 923 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 ATG10-AS1-201ENST00000504846 648 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 HMGB1P44-201ENST00000508597 572 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 SNORA70.17-201ENST00000516449 133 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM1O00151 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM1O00151 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.81□□□□□ -1.64
PDLIM1O00151 BLZF2P-201ENST00000553776 1130 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.81□□□□□ -1.64
PDLIM1O00151 AC008814.1-201ENST00000603797 406 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 AL135786.2-201ENST00000608422 615 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM1O00151 CASC19-222ENST00000641321 1173 ntBASIC4.81□□□□□ -1.64
PDLIM1O00151 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM1O00151 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM1O00151 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PDLIM1O00151 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PDLIM1O00151 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM1O00151 IRF5P1-201ENST00000504852 2164 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC074029.4-201ENST00000624796 1859 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDLIM1O00151 MIR133B-201ENST00000362210 119 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 RNU1-20P-201ENST00000363314 162 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 MIR93-201ENST00000385024 80 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 HSPA8P15-201ENST00000401676 786 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM1O00151 OR51A6P-201ENST00000418680 1004 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 SKP1P3-201ENST00000429280 487 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC009238.2-201ENST00000431026 355 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC104634.1-201ENST00000452720 462 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC093166.2-201ENST00000455969 1017 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.8□□□□□ -1.64
PDLIM1O00151 GYG1P1-201ENST00000460864 698 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AL133445.1-201ENST00000467051 452 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.8□□□□□ -1.64
PDLIM1O00151 AC006427.1-201ENST00000514359 712 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 BX510359.5-201ENST00000515651 304 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 RPL23AP53-201ENST00000521854 457 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC018442.3-201ENST00000523025 183 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM1O00151 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.8□□□□□ -1.64
PDLIM1O00151 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM1O00151 AC005868.1-201ENST00000536421 331 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC126177.5-201ENST00000549599 178 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC005341.1-201ENST00000571086 708 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC090312.1-201ENST00000580637 348 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 OR1AB1P-201ENST00000585564 761 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 AC022387.2-201ENST00000604050 448 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AC005252.1-201ENST00000604518 1063 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 BNIP3P35-201ENST00000604530 490 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 AP000864.1-201ENST00000609424 650 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 WBP1LP8-201ENST00000617401 327 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM1O00151 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 CASC19-264ENST00000641912 1184 ntBASIC4.8□□□□□ -1.64
PDLIM1O00151 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
PDLIM1O00151 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDLIM1O00151 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDLIM1O00151 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM1O00151 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDLIM1O00151 CIR1P2-201ENST00000514821 1342 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PDLIM1O00151 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC104297.1-201ENST00000393779 870 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 RNU6-564P-201ENST00000410983 104 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 EIF4A1P3-201ENST00000411521 244 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AL390774.1-201ENST00000411924 246 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 RAC1P3-201ENST00000416129 580 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 MTCO1P51-201ENST00000427672 1060 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 CFL1P1-202ENST00000432948 411 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AL353748.1-201ENST00000440753 474 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 RPS26P41-201ENST00000450370 284 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 COPS8P2-201ENST00000473228 627 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM1O00151 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.79□□□□□ -1.64
PDLIM1O00151 ENPP7P9-201ENST00000514456 627 ntBASIC4.79□□□□□ -1.64
PDLIM1O00151 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.79□□□□□ -1.64
PDLIM1O00151 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms