Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC024940.3-201ENST00000538551 316 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 AC139713.2-215ENST00000641428 5037 ntBASIC5.16□□□□□ -1.58
CCDC188H7C350 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC188H7C350 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC188H7C350 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC188H7C350 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC188H7C350 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC188H7C350 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC188H7C350 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC188H7C350 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC188H7C350 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC188H7C350 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC188H7C350 RNU1-83P-201ENST00000363426 164 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 SNORA70.10-201ENST00000384515 134 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AL356057.1-202ENST00000402263 756 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 RPS3P2-201ENST00000421346 701 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC188H7C350 MTND5P8-201ENST00000449817 1083 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AC112191.2-201ENST00000522428 333 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC188H7C350 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC188H7C350 NOP56P3-201ENST00000549457 385 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.15□□□□□ -1.59
CCDC188H7C350 DPRXP4-201ENST00000578053 568 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC188H7C350 OR4H6P-202ENST00000603819 340 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 AL356490.1-201ENST00000623079 479 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC188H7C350 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC188H7C350 ECM1P2-201ENST00000503354 1577 ntBASIC5.15□□□□□ -1.59
CCDC188H7C350 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC188H7C350 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCDC188H7C350 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC188H7C350 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC188H7C350 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC188H7C350 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC188H7C350 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC188H7C350 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC188H7C350 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
CCDC188H7C350 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 RN7SKP114-201ENST00000410327 279 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC188H7C350 FABP7P1-201ENST00000424004 391 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC023512.1-201ENST00000444513 499 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 RPL36AP39-201ENST00000445859 318 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AL500527.1-201ENST00000448532 255 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AC011225.1-201ENST00000457751 369 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC188H7C350 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC188H7C350 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AP002373.2-201ENST00000541631 1060 ntBASIC5.14□□□□□ -1.59
CCDC188H7C350 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC188H7C350 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms