Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL354766.1-201ENST00000423396 542 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AL161722.2-201ENST00000434731 981 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 CBX1P2-201ENST00000453841 458 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 DNAJB5P1-201ENST00000454004 806 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC091685.2-201ENST00000454924 864 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 MTND2P6-201ENST00000455337 1030 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC116562.1-201ENST00000485355 781 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AP002373.2-201ENST00000541631 1060 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC021483.2-201ENST00000567415 758 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AL671309.1-201ENST00000603750 544 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC135178.6-201ENST00000605314 398 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AL049539.1-201ENST00000611964 459 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC073575.2-201ENST00000614212 627 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AC100827.5-201ENST00000615883 426 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AL445528.2-201ENST00000620582 470 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 AP001002.1-201ENST00000625148 1513 ntBASIC4.72□□□□□ -1.65
NPIPA3F8WFD2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA3F8WFD2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA3F8WFD2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.65
NPIPA3F8WFD2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA3F8WFD2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA3F8WFD2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC023421.1-201ENST00000590535 1785 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 Y_RNA.110-201ENST00000363220 99 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 RNA5SP223-201ENST00000365174 120 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 SNORA40.4-201ENST00000390971 128 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 ATP5HP3-201ENST00000396994 486 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC073508.1-201ENST00000428866 656 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 CYCSP11-201ENST00000436426 315 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 RPS29P10-201ENST00000439197 166 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC023512.1-201ENST00000444513 499 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 RPL7P41-201ENST00000485823 957 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 RPSAP51-201ENST00000497462 645 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 MTND3P24-201ENST00000506306 329 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 OR5D15P-201ENST00000531671 942 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 SETP1-201ENST00000556014 845 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC011840.5-201ENST00000582125 771 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC012557.1-201ENST00000607115 611 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC004775.1-201ENST00000607389 753 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC006840.1-201ENST00000623069 542 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC145207.9-201ENST00000623802 325 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AC135068.12-201ENST00000637370 931 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 TMEM30CP-203ENST00000637814 1035 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 PANDAR-201ENST00000629595 1506 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 AP001029.2-203ENST00000589795 4910 ntBASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA3F8WFD2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms