Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A3BPQ9Y5P4 AC090017.1-201ENST00000548612 1779 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC119744.1-201ENST00000454746 1715 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AP002512.4-202ENST00000641599 4530 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU1-87P-201ENST00000363727 170 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 SNORD116-12-201ENST00000384468 92 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU2-6P-201ENST00000411404 190 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 BMS1P17-202ENST00000416720 316 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC242426.1-201ENST00000435270 960 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 HMGB1P45-201ENST00000435986 653 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ACTR3P2-201ENST00000439585 1257 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 EEF1B2P6-201ENST00000445713 673 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RPL7P6-201ENST00000480903 738 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC020699.1-201ENST00000505161 445 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC136777.2-201ENST00000522979 358 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 NIFKP8-201ENST00000560500 874 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 MIR4505-201ENST00000582238 73 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC025857.2-201ENST00000602711 238 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AL450336.1-201ENST00000605180 586 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 MIR6768-201ENST00000610734 72 ntBASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.36□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC004076.2-201ENST00000620532 3323 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MIR130A-201ENST00000385274 89 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MTCO2P31-201ENST00000402702 684 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 RN7SKP59-201ENST00000410520 314 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AL513325.1-201ENST00000417716 1034 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC079355.1-201ENST00000421770 223 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 RHEBP2-201ENST00000450289 600 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 NPM1P13-201ENST00000452663 865 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 RPS3AP53-201ENST00000454716 778 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 DUTP1-201ENST00000493631 470 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MRPS16P1-201ENST00000523462 412 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 BNIP3P32-201ENST00000600015 554 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AL583856.2-201ENST00000606298 543 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC116447.1-201ENST00000613153 453 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC090607.5-201ENST00000615692 224 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AL035661.1-201ENST00000620459 1144 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms