Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AL136131.1-201ENST00000406079 803 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 MFSD13B-201ENST00000420133 1290 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 C1DP1-201ENST00000426049 402 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC127526.2-201ENST00000426436 775 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 YWHAEP5-201ENST00000431545 765 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 ARAFP2-201ENST00000440565 559 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC068135.1-201ENST00000446164 246 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 NPM1P13-201ENST00000452663 865 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 RPL7P48-201ENST00000461513 746 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 RPL32P9-201ENST00000487963 407 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC093890.1-201ENST00000502554 540 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC113347.3-201ENST00000509113 148 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 Y_RNA.688-201ENST00000516565 95 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AP006245.2-201ENST00000522004 300 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC124293.1-201ENST00000530034 493 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC135279.1-201ENST00000543493 504 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC126615.2-201ENST00000553003 515 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 MIR4260-201ENST00000583107 67 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC010503.3-201ENST00000594355 540 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC093388.1-201ENST00000609166 430 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AC018445.2-201ENST00000622987 260 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AP004607.3-201ENST00000530354 3915 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
PCDHB1Q9Y5F3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC017079.1-201ENST00000333650 415 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 SNORA64.1-201ENST00000362600 132 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 DPPA2P3-201ENST00000411853 655 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC092745.2-202ENST00000411880 369 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 OR2AT2P-201ENST00000413438 905 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 NPM1P4-201ENST00000414095 812 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ELOCP9-201ENST00000418624 239 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 RNGTTP1-201ENST00000420965 728 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AL627308.1-201ENST00000435693 821 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 RPL7P29-201ENST00000437151 728 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 ARL5AP2-201ENST00000444698 533 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 OR7E116P-201ENST00000448529 957 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MEMO1P4-201ENST00000453590 386 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 RN7SL610P-201ENST00000463845 291 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 SIAH1P1-201ENST00000479411 923 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC090058.1-201ENST00000498788 435 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC074255.1-201ENST00000511259 501 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AP001542.2-201ENST00000593141 364 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC025165.5-201ENST00000602802 578 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 Z94722.1-201ENST00000604328 474 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AL139344.1-201ENST00000605228 195 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC024257.5-201ENST00000612739 531 ntBASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHB1Q9Y5F3 AC017037.3-201ENST00000625016 472 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms