Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC044860.2-201ENST00000561005 179 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AGGF1P6-201ENST00000569213 976 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC124283.4-201ENST00000581815 456 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 H3F3BP2-201ENST00000583907 357 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC068790.2-201ENST00000602601 557 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC079880.2-201ENST00000603790 1213 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC009090.3-201ENST00000616553 565 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 FRG1EP-201ENST00000634469 770 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 SAMMSON-227ENST00000642114 1199 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 AC015813.6-201ENST00000624409 5808 ntBASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTDP1Q9Y5B0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC099786.3-201ENST00000565735 1410 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MRRFP1-201ENST00000435941 1675 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 RAD1P1-201ENST00000231383 813 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MIR365B-201ENST00000362317 111 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MIR513B-201ENST00000385136 84 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 HMGB1P13-201ENST00000406019 642 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 OSTCP5-201ENST00000425293 453 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AL606490.7-201ENST00000433136 191 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 RPS7P2-201ENST00000435134 607 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 USP9YP28-201ENST00000435142 589 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MTCYBP29-201ENST00000436327 1006 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 OR10R1P-201ENST00000441524 1141 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 NAP1L1P3-201ENST00000462291 880 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 UBA52P7-201ENST00000486088 380 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 HMGB1P3-201ENST00000502802 616 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC091435.1-201ENST00000505442 584 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC006499.3-201ENST00000506077 748 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 BUD31P1-201ENST00000521828 359 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MTCYBP33-201ENST00000575007 1130 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 MIR4675-201ENST00000577898 77 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 PIGPP4-201ENST00000584447 307 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AL358072.1-201ENST00000604156 575 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 HIRAP1-201ENST00000605318 787 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC025574.2-201ENST00000615621 514 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC090617.9-201ENST00000623751 147 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC235565.1-201ENST00000456962 1325 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 AC016745.2-201ENST00000608834 3443 ntBASIC6.43□□□□□ -1.38
CTDP1Q9Y5B0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 OR9K1P-202ENST00000641111 3217 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 SNORA70-201ENST00000384436 135 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 RPS24P7-201ENST00000416921 246 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms