Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RN7SKP260-201ENST00000516907 149 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC026616.1-201ENST00000523157 525 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC012339.2-201ENST00000523996 453 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC084373.1-201ENST00000603311 235 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC073111.2-201ENST00000605657 1075 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AC021106.3-201ENST00000623925 531 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 AL118508.4-201ENST00000624142 1176 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 OR51C1P-202ENST00000641159 1444 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 HSPA8P18-201ENST00000439846 1928 ntBASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG4BQ9Y4P1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 THAP12P4-201ENST00000528321 2266 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC104623.2-202ENST00000623477 4002 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC002524.1-201ENST00000411687 547 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 RPS26P13-201ENST00000419030 330 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 OR6K4P-201ENST00000423179 955 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 TRIM60P13-201ENST00000432350 1283 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 RHOT1P3-201ENST00000436571 331 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AL450023.3-201ENST00000440592 271 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AL354714.3-201ENST00000447284 493 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 TCEA1P1-201ENST00000449716 880 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 HMGB1P4-201ENST00000455362 567 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 NDUFA5P12-201ENST00000503796 343 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC098799.1-201ENST00000504752 800 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 ENPP7P11-201ENST00000505915 627 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC034244.2-201ENST00000514668 858 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 RN7SKP66-201ENST00000516681 231 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC018442.3-201ENST00000523025 183 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AL627230.1-201ENST00000613077 211 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AL591926.8-201ENST00000616876 211 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AL356274.1-201ENST00000617064 410 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 STX3-208ENST00000641815 3236 ntBASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
ATG4BQ9Y4P1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 RNA5SP455-201ENST00000365190 119 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 SNORA70.10-201ENST00000384515 134 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 SNORA66-201ENST00000384792 133 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms