Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPS4XP4-201ENST00000443195 763 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 CRYGGP-201ENST00000443337 145 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 OR6C5P-201ENST00000452388 923 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RPL23AP23-201ENST00000452590 471 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 Z83838.1-202ENST00000456225 839 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RN7SL552P-201ENST00000462094 276 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC094085.1-201ENST00000468914 584 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RN7SL187P-201ENST00000495587 303 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC091133.4-201ENST00000511142 308 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 COX6CP5-201ENST00000527162 228 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 OR5AZ1P-201ENST00000527448 943 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 NOP56P3-201ENST00000549457 385 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AADACP1-206ENST00000561502 1193 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC004232.1-201ENST00000571388 208 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 MTCO1P40-201ENST00000574371 625 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AL359704.2-201ENST00000604335 521 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 MIR6862-1-201ENST00000613016 70 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 RN7SL261P-201ENST00000613441 282 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 MIR6862-2-201ENST00000614755 70 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AL590410.1-201ENST00000617925 333 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AC134503.1-201ENST00000633048 54 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 AL034408.1-201ENST00000637712 664 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 Z97989.1-201ENST00000531702 2421 ntBASIC8.48□□□□□ -1.05
PDZRN3Q9UPQ7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL359694.2-201ENST00000567753 1615 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AP000776.1-201ENST00000530032 1663 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 MT-TG-201ENST00000387429 68 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC104297.1-201ENST00000393779 870 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL391422.1-201ENST00000402155 436 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 Y_RNA.605-201ENST00000410577 105 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 RAB28P1-201ENST00000411517 641 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 RAC1P8-201ENST00000427086 527 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 GAPDHP59-201ENST00000435908 267 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL450263.2-201ENST00000439400 589 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC233279.1-201ENST00000455300 423 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC023818.1-201ENST00000498379 384 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 HPRT1P2-201ENST00000505250 544 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC091849.1-201ENST00000509920 121 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 RN7SKP141-201ENST00000516167 338 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AK6P1-201ENST00000540219 478 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 RPL41P2-201ENST00000544920 409 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC019322.1-201ENST00000571869 389 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 VN1R79P-201ENST00000593540 513 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC120349.2-201ENST00000625002 298 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms