Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC087283.1-201ENST00000604029 1074 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 AC010424.2-201ENST00000607594 443 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 OR8G7P-201ENST00000616658 848 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 FRG1EP-201ENST00000634469 770 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 MAPK10-263ENST00000641052 4307 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 TCP1P3-201ENST00000414406 1498 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCF1Q9UBD9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 U3.30-201ENST00000391308 210 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP345-201ENST00000410646 108 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 RAB9AP4-201ENST00000415230 609 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 BX510359.2-201ENST00000417920 305 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 NRBF2P3-201ENST00000432731 865 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 SNRPFP2-201ENST00000440710 251 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC010733.1-201ENST00000451515 401 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC011005.3-201ENST00000491624 395 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AP001880.2-201ENST00000538233 448 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 TRAV11-201ENST00000539512 339 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 CR383656.6-201ENST00000550518 394 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL049874.4-201ENST00000557593 255 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MIR4330-201ENST00000579077 105 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC007497.1-201ENST00000610421 561 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MIR6748-201ENST00000610433 71 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 NCLP2-201ENST00000416078 1462 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC068446.1-201ENST00000556425 1549 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 AC008758.3-201ENST00000507003 1829 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.35□□□□□ -1.71
CLCF1Q9UBD9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 RNA5SP443-201ENST00000363083 132 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 MIR192-201ENST00000384915 110 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 RPL26P29-201ENST00000415623 438 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC019050.1-201ENST00000418508 492 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC073052.1-201ENST00000440417 714 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AL138878.2-201ENST00000440581 1241 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 TCEA1P3-201ENST00000443005 880 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 RPL36AP15-201ENST00000444514 266 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 AC006967.1-201ENST00000467608 589 ntBASIC4.34□□□□□ -1.71
CLCF1Q9UBD9 SEPT7P6-201ENST00000469999 1143 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms