Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 RN7SL690P-201ENST00000582087 240 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC068790.7-201ENST00000602347 528 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC004948.1-201ENST00000609858 672 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL161616.1-201ENST00000611867 286 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 U3.53-201ENST00000628922 216 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL355852.1-201ENST00000454081 1771 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL133268.1-201ENST00000405676 1401 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 ZNF137P-201ENST00000456718 1920 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 AL391684.1-202ENST00000641293 1636 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 RN7SKP115-201ENST00000363177 317 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 AL049697.2-201ENST00000403708 294 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 CEACAMP6-201ENST00000452007 574 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 SCARNA10-201ENST00000459255 330 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC112206.1-201ENST00000468416 477 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 MTND4LP2-201ENST00000502312 285 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 ASNSP4-201ENST00000511103 447 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC007016.1-201ENST00000512110 244 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC016839.1-201ENST00000578162 867 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 COX6CP4-201ENST00000605798 228 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 MIR6780A-201ENST00000615089 68 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 AC004232.3-201ENST00000622977 525 ntBASIC4.94□□□□□ -1.62
CISHQ9NSE2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.94□□□□□ -1.62
CISHQ9NSE2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CISHQ9NSE2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AL672167.1-203ENST00000641299 2975 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 KARSP3-201ENST00000571212 1504 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 RNU2-50P-201ENST00000410494 143 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 RPL21P43-201ENST00000425440 472 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 ISCUP1-201ENST00000454451 448 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC209154.1-201ENST00000582156 337 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC116651.1-201ENST00000609724 556 ntBASIC4.93□□□□□ -1.62
CISHQ9NSE2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
CISHQ9NSE2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CISHQ9NSE2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC108467.2-201ENST00000617640 1597 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC021146.4-201ENST00000309229 279 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CISHQ9NSE2 SNORA71.2-201ENST00000364941 134 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 RNA5SP397-201ENST00000391323 118 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 DPPA2P2-201ENST00000418220 897 ntBASIC4.92□□□□□ -1.62
CISHQ9NSE2 AC019050.1-201ENST00000418508 492 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms