Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC012078.1-201ENST00000405035 1646 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AL590762.2-201ENST00000395798 571 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 ELOCP19-201ENST00000411919 318 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AL591848.1-201ENST00000413092 322 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 RANP7-201ENST00000418085 644 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 RPL18P10-201ENST00000425606 538 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 OR2AH1P-201ENST00000425717 928 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC093166.2-201ENST00000455969 1017 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 RPL36AP41-201ENST00000493820 306 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 HMGB3P16-201ENST00000508037 287 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 PRELID3BP5-201ENST00000508612 460 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC021733.2-201ENST00000518830 497 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC009852.2-201ENST00000567898 485 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 CYCSP40-201ENST00000575927 294 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 RN7SL652P-201ENST00000577769 300 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 MIR4715-201ENST00000584117 79 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AC020915.5-201ENST00000596836 964 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 AL139041.1-201ENST00000605480 610 ntBASIC5.73□□□□□ -1.49
SALL1Q9NSC2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL1Q9NSC2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AL356317.1-201ENST00000396110 1436 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 MIR23A-201ENST00000385245 73 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 RNU1-82P-201ENST00000390851 165 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 DPPA2P2-201ENST00000418220 897 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AC090589.1-201ENST00000473109 362 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 EIF4EP5-201ENST00000528228 640 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 AC010809.3-201ENST00000621310 641 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 OR56B2P-202ENST00000641377 2453 ntBASIC5.72□□□□□ -1.49
SALL1Q9NSC2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SALL1Q9NSC2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.71□□□□□ -1.49
SALL1Q9NSC2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SALL1Q9NSC2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC018628.1-201ENST00000624147 3819 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 U3.35-201ENST00000408405 208 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 SMC4P1-201ENST00000414479 527 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 H2AFZP5-201ENST00000446960 382 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC020890.1-201ENST00000491837 504 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 MIR4284-201ENST00000578924 81 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC107993.1-201ENST00000591343 684 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC012414.7-202ENST00000622705 1090 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC004232.3-201ENST00000622977 525 ntBASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL1Q9NSC2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL1Q9NSC2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SALL1Q9NSC2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL1Q9NSC2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL1Q9NSC2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms