Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NECTIN3Q9NQS3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NECTIN3Q9NQS3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
NECTIN3Q9NQS3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 SNORA64.1-201ENST00000362600 132 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 RNU6-353P-201ENST00000364266 108 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 RNA5SP122-201ENST00000384457 108 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL021331.1-201ENST00000402817 582 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL121878.1-201ENST00000418638 859 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC104843.2-201ENST00000427666 297 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC092634.2-201ENST00000428146 1010 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 VN1R25P-201ENST00000443385 738 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC022215.1-201ENST00000481770 362 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC105384.2-201ENST00000508433 640 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 MTATP6P1-201ENST00000514057 681 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 HMGB1P23-201ENST00000518743 568 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 OR8A2P-201ENST00000528631 952 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL121594.2-201ENST00000541658 472 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 EIF1P6-201ENST00000600054 334 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC234772.3-201ENST00000602277 528 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AL162574.1-201ENST00000615702 950 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC123767.1-202ENST00000620407 817 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC006963.1-201ENST00000624003 1052 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 AC087565.3-203ENST00000641018 837 ntBASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NECTIN3Q9NQS3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 AC111188.2-201ENST00000529697 1387 ntBASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NECTIN3Q9NQS3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 RNU6-549P-201ENST00000384433 107 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC093155.2-201ENST00000420734 937 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 CRIP1P1-201ENST00000427567 185 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 NPM1P22-201ENST00000427761 952 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL022331.1-201ENST00000429025 477 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 MTCO3P21-201ENST00000430791 643 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 RPS24P8-201ENST00000431490 402 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 CBX1P4-201ENST00000439415 457 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL929288.2-201ENST00000446368 407 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 OR7E116P-201ENST00000448529 957 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ZNF886P-201ENST00000450781 723 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 PTGES3P5-201ENST00000455109 434 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC091959.2-201ENST00000477363 321 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms