Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA26.10-201ENST00000516427 141 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 OR10D4P-201ENST00000525892 951 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC021006.3-201ENST00000530771 192 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC133555.2-201ENST00000550213 292 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 HMGN2P6-201ENST00000551091 273 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC079075.1-201ENST00000559543 878 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 FAM60CP-201ENST00000591086 664 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 OR7E18P-201ENST00000592589 702 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC125494.2-201ENST00000602431 657 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AC016542.1-201ENST00000608259 493 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 AL356490.1-201ENST00000623079 479 ntBASIC5.12□□□□□ -1.59
SIX2Q9NPC8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIX2Q9NPC8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 RNA5SP191-201ENST00000362585 102 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 RNU1-82P-201ENST00000390851 165 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL109941.1-201ENST00000401925 229 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL080315.1-201ENST00000406055 466 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC004074.1-201ENST00000421810 1063 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 RPL17P35-201ENST00000432217 549 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC104651.2-201ENST00000447549 528 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 OR52J1P-201ENST00000450596 932 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC079168.2-201ENST00000453977 416 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC092451.2-201ENST00000538746 658 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL136520.1-202ENST00000555494 763 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 FAM27B-201ENST00000610601 213 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL590410.1-201ENST00000617925 333 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC253576.2-201ENST00000618815 580 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC018445.2-201ENST00000622987 260 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL359757.1-201ENST00000623176 255 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL603750.1-201ENST00000624216 1717 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AL031119.1-201ENST00000404707 1879 ntBASIC5.11□□□□□ -1.59
SIX2Q9NPC8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX2Q9NPC8 AC126323.6-202ENST00000568092 3511 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 RSU1P3-201ENST00000412878 835 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AL445528.1-201ENST00000426330 420 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 RPL23AP37-201ENST00000479658 549 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC026782.2-201ENST00000510845 636 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC112206.4-201ENST00000515142 405 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 RNA5SP464-201ENST00000516251 108 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 RARSP1-201ENST00000542842 1418 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 MTND2P13-201ENST00000577438 1039 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC010487.1-201ENST00000594408 1172 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AP000240.1-201ENST00000609910 452 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 AC007382.1-201ENST00000624376 2618 ntBASIC5.1□□□□□ -1.59
SIX2Q9NPC8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SIX2Q9NPC8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms